RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 CHN2P52757 468 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 ARF1P84077 181 aaKnown RBP16.3■□□□□ 0.2
SRSF4-202ENST00000466448 RPS26P11Q5JNZ5 115 aaPredicted RBP16.3■□□□□ 0.2
SRSF4-202ENST00000466448 SERPINA11Q86U17 422 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 KIRREL3Q8IZU9 778 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 SLC38A5Q8WUX1 472 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 NEU4Q8WWR8 484 aaPredicted RBP16.3■□□□□ 0.2
SRSF4-202ENST00000466448 HPS1Q92902 700 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 SNX18Q96RF0 628 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 PTDSS2Q9BVG9 487 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 SEC14L4Q9UDX3 406 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 FBXO9Q9UK97 447 aaPredicted RBP16.3■□□□□ 0.2
SRSF4-202ENST00000466448 GPR45Q9Y5Y3 372 aa16.3■□□□□ 0.2
SRSF4-202ENST00000466448 ZNF503-AS2A6NEH8 195 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 RPL36A-HNRNPH2H7BZ11 118 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 SDHDO14521 159 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 RFXANKO14593 260 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 TCF21O43680 179 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 ZNF432O94892 652 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 AHSA1O95433 338 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 ERCC1P07992 297 aaPredicted RBP16.29■□□□□ 0.2
SRSF4-202ENST00000466448 IGFBP1P08833 259 aaPredicted RBP16.29■□□□□ 0.2
SRSF4-202ENST00000466448 HOXB1P14653 301 aaPredicted RBP16.29■□□□□ 0.2
SRSF4-202ENST00000466448 CBR1P16152 277 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 NPR2P20594 1047 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 APEX1P27695 318 aaKnown RBP16.29■□□□□ 0.2
SRSF4-202ENST00000466448 CRISP3P54108 245 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 CLDN17P56750 224 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 ATG16L1Q676U5 607 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 SPATA21Q7Z572 469 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 RFLNBQ8N5W9 214 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 ANKK1Q8NFD2 765 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 MFSD8Q8NHS3 518 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 STK35Q8TDR2 534 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 SLC25A36Q96CQ1 311 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 CALML5Q9NZT1 146 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 TMEFF2Q9UIK5 374 aaPredicted RBP16.29■□□□□ 0.2
SRSF4-202ENST00000466448 RCE1Q9Y256 329 aa16.29■□□□□ 0.2
SRSF4-202ENST00000466448 IGHV2OR16-5A0A0B4J2B6 119 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 TMEM129A0AVI4 362 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 SH3PXD2BA1X283 911 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 TM9SF1O15321 606 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 CRATP43155 626 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 RPS5P46782 204 aaKnown RBP16.28■□□□□ 0.2
SRSF4-202ENST00000466448 EGR4Q05215 589 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 STX3Q13277 289 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 MPP2Q14168 576 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 LARS2Q15031 903 aaKnown RBP16.28■□□□□ 0.2
SRSF4-202ENST00000466448 TRIP10Q15642 601 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 CDK20Q8IZL9 346 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 ZNF786Q8N393 782 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 LINC01356Q8N9X3 169 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 ZNF837Q96EG3 531 aaPredicted RBP16.28■□□□□ 0.2
SRSF4-202ENST00000466448 ANKRD27Q96NW4 1050 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 ZBTB18Q99592 522 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 WDR55Q9H6Y2 383 aaPredicted RBP16.28■□□□□ 0.2
SRSF4-202ENST00000466448 SSU72Q9NP77 194 aaKnown RBP16.28■□□□□ 0.2
SRSF4-202ENST00000466448 B3GAT1Q9P2W7 334 aa16.28■□□□□ 0.2
SRSF4-202ENST00000466448 VSTM5A8MXK1 200 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 RGS16O15492 202 aaPredicted RBP16.27■□□□□ 0.2
SRSF4-202ENST00000466448 SLC43A1O75387 559 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 ZNF43P17038 809 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 ITGA2P17301 1181 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 EPHA3P29320 983 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 ARR3P36575 388 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 SRP14P37108 136 aaKnown RBP16.27■□□□□ 0.2
SRSF4-202ENST00000466448 DSTNP60981 165 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 HOXC5Q00444 222 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 BST1Q10588 318 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 NPRL3Q12980 569 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 RIN1Q13671 783 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 ADRM1Q16186 407 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 CEACAM16Q2WEN9 425 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 KRT71Q3SY84 523 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 GLB1L3Q8NCI6 653 aaPredicted RBP16.27■□□□□ 0.2
SRSF4-202ENST00000466448 CKAP2Q8WWK9 683 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 KTI12Q96EK9 354 aaPredicted RBP16.27■□□□□ 0.2
SRSF4-202ENST00000466448 TMEM19Q96HH6 336 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 SPATA9Q9BWV2 254 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 CRLF2Q9HC73 371 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 GPR35Q9HC97 309 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 DYNLRB1Q9NP97 96 aa16.27■□□□□ 0.2
SRSF4-202ENST00000466448 HEATR1Q9H583 2144 aaKnown RBP16.27■□□□□ 0.19
SRSF4-202ENST00000466448 LYNX1G3V0Z9 82 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 SEC14L2O76054 403 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 ADRA2AP08913 450 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 LYNX1P0DP58 116 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 IFNGR1P15260 489 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 GTF2E2P29084 291 aaKnown RBP16.26■□□□□ 0.19
SRSF4-202ENST00000466448 CDH15P55291 814 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 SNTB2Q13425 540 aaKnown RBP16.26■□□□□ 0.19
SRSF4-202ENST00000466448 GTDC1Q4AE62 458 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 KRT80Q6KB66 452 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 MDP1Q86V88 176 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 GPR137CQ8N3F9 429 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 UBASH3BQ8TF42 649 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 VPS33AQ96AX1 596 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 OXGR1Q96P68 337 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 TPT1P8Q9HAU6 139 aa16.26■□□□□ 0.19
SRSF4-202ENST00000466448 NOX3Q9HBY0 568 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms