RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MLF2Q15773 248 aaPredicted RBP18.09■□□□□ 0.49
SDF4-205ENST00000465727 ZNF77Q15935 545 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 SLC6A19Q695T7 634 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 COL26A1Q96A83 441 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 XKR8Q9H6D3 395 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 APMAPQ9HDC9 416 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 DUSP22Q9NRW4 184 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 USP36Q9P275 1121 aaKnown RBP18.09■□□□□ 0.49
SDF4-205ENST00000465727 ZFPL1O95159 310 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 NDUFB2O95178 105 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 AK1P00568 194 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 CNR1P21554 472 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 SCRN3Q0VDG4 424 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 ZNF345Q14585 488 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 OR4K13Q8NH42 304 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 CCDC107Q8WV48 283 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 EDAQ92838 391 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 GAL3ST3Q96A11 431 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 MYADMQ96S97 322 aa18.08■□□□□ 0.49
SDF4-205ENST00000465727 INSM2Q96T92 566 aaPredicted RBP18.08■□□□□ 0.49
SDF4-205ENST00000465727 GPR89AB7ZAQ6 455 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 MELTFP08582 738 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 GPR89BP0CG08 455 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 AKAIN1P0CW23 69 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 ITPKBP27987 946 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 RORAP35398 523 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 STARP49675 285 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 BTN3A2P78410 334 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 TNFRSF17Q02223 184 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 SSBP1Q04837 148 aaKnown RBP18.08■□□□□ 0.48
SDF4-205ENST00000465727 MELKQ14680 651 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 Q499Y3 187 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 EXOSC6Q5RKV6 272 aaKnown RBP18.08■□□□□ 0.48
SDF4-205ENST00000465727 OR2L3Q8NG85 312 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 OR4K14Q8NGD5 310 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 RGP1Q92546 391 aaPredicted RBP18.08■□□□□ 0.48
SDF4-205ENST00000465727 RBM18Q96H35 190 aaKnown RBP18.08■□□□□ 0.48
SDF4-205ENST00000465727 PBX4Q9BYU1 374 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 PIGMQ9H3S5 423 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 SCPEP1Q9HB40 452 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 ACTR10Q9NZ32 417 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 KCNE5Q9UJ90 142 aa18.08■□□□□ 0.48
SDF4-205ENST00000465727 TMEM272A0A1B0GTI8 110 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 PEX12O00623 359 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 PRICKLE3O43900 615 aaPredicted RBP18.07■□□□□ 0.48
SDF4-205ENST00000465727 FGF19O95750 216 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 CISD3P0C7P0 127 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 LTBQ06643 244 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 STPG1Q5TH74 334 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 LILRA6Q6PI73 481 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 ZNF546Q86UE3 836 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 RELL2Q8NC24 303 aaPredicted RBP18.07■□□□□ 0.48
SDF4-205ENST00000465727 BPIFCQ8NFQ6 507 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 HSPA12BQ96MM6 686 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 STACQ99469 402 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 C1orf198Q9H425 327 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 PRDM9Q9NQV7 894 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 C19orf53Q9UNZ5 99 aaPredicted RBP18.07■□□□□ 0.48
SDF4-205ENST00000465727 WNT6Q9Y6F9 365 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 RASGRP1O95267 797 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 PMS2P2O95744 297 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 ELAVL3Q14576 367 aaKnown RBP18.07■□□□□ 0.48
SDF4-205ENST00000465727 RPE65Q16518 533 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 GRHL3Q8TE85 626 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 POLE3Q9NRF9 147 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 SLC39A1Q9NY26 324 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 UPB1Q9UBR1 384 aa18.07■□□□□ 0.48
SDF4-205ENST00000465727 EDDM13A0A1B0GTR0 161 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 ZNF254O75437 659 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 ATG12O94817 140 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 CD8AP01732 235 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 TACSTD2P09758 323 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 CSF2RBP32927 897 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 NANOS3P60323 173 aaKnown RBP18.06■□□□□ 0.48
SDF4-205ENST00000465727 TEAD2Q15562 447 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 ZCCHC12Q6PEW1 402 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 ZNF227Q86WZ6 799 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 KCNRGQ8N5I3 272 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 COX18Q8N8Q8 333 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 CDRT4Q8N9R6 151 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 OR51L1Q8NGJ5 315 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 LGR4Q9BXB1 951 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 CCDC86Q9H6F5 360 aaKnown RBP18.06■□□□□ 0.48
SDF4-205ENST00000465727 MLXQ9UH92 298 aa18.06■□□□□ 0.48
SDF4-205ENST00000465727 KANTRA0A1W2PQU2 76 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 SYNDIG1LA6NDD5 238 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 CCL16O15467 120 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 OR2F2O95006 317 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 GP1BAP07359 652 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 CMPK1P30085 196 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 OR2F1Q13607 317 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 COL9A2Q14055 689 aaPredicted RBP18.05■□□□□ 0.48
SDF4-205ENST00000465727 HNRNPA1L2Q32P51 320 aaKnown RBP18.05■□□□□ 0.48
SDF4-205ENST00000465727 C4orf46Q504U0 113 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 ZNF684Q5T5D7 378 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 LHX8Q68G74 356 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 ANKRD16Q6P6B7 361 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 USP53Q70EK8 1073 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 KREMEN2Q8NCW0 462 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 ZMAT5Q9UDW3 170 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms