RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 TMEM45BQ96B21 275 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 DHRS1Q96LJ7 313 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 PIP5K1AQ99755 562 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 LRMDAQ9H2I8 198 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 MAGIXQ9H6Y5 334 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 NANSQ9NR45 359 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 B3GAT1Q9P2W7 334 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 ZNF229Q9UJW7 825 aa18■□□□□ 0.47
PTCD3-206ENST00000465560 LOC102725191A0A1B0GVB3 256 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 A0A1W2PRQ8 180 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 HTR3EA5X5Y0 456 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 MRPL33O75394 65 aaKnown RBP17.99■□□□□ 0.47
PTCD3-206ENST00000465560 DIRAS1O95057 198 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 H1F0P07305 194 aaKnown RBP17.99■□□□□ 0.47
PTCD3-206ENST00000465560 COX6B1P14854 86 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 POU2F1P14859 743 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 EDNRAP25101 427 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 NTF4P34130 210 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 PMS2P3Q13401 168 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 DGCR6Q14129 220 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 EXOC3L2Q2M3D2 409 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 CREB3L2Q70SY1 520 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 ZDHHC21Q8IVQ6 265 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 KDM8Q8N371 416 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 ZIC4Q8N9L1 334 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 OR5J2Q8NH18 312 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 ACOT11Q8WXI4 607 aaPredicted RBP17.99■□□□□ 0.47
PTCD3-206ENST00000465560 APH1AQ96BI3 265 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 SGTBQ96EQ0 304 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 OXGR1Q96P68 337 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 ZNF385AQ96PM9 386 aaKnown RBP17.99■□□□□ 0.47
PTCD3-206ENST00000465560 SEPHS2Q99611 448 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 C20orf141Q9NUB4 165 aa17.99■□□□□ 0.47
PTCD3-206ENST00000465560 AQP12BA6NM10 295 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 MS4A18H0YCH9 400 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 PLPP3O14495 311 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 PIP5K1CO60331 668 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 OR7A10O76100 309 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 CNOT4O95628 575 aaKnown RBP17.98■□□□□ 0.47
PTCD3-206ENST00000465560 ASAH2BP0C7U1 165 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 ZNF43P17038 809 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 MAGEA2P43356 314 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 PUDPQ08623 228 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 FAM27E3Q08E93 113 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 MS4A18Q3C1V0 323 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 CASP12Q6UXS9 341 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 CCDC121Q6ZUS5 278 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.98■□□□□ 0.47
PTCD3-206ENST00000465560 PIWIL3Q7Z3Z3 882 aaKnown RBP17.98■□□□□ 0.47
PTCD3-206ENST00000465560 EPHX4Q8IUS5 362 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 AQP12AQ8IXF9 295 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 ZNF100Q8IYN0 542 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 RNF113BQ8IZP6 322 aaKnown RBP17.98■□□□□ 0.47
PTCD3-206ENST00000465560 SLC7A13Q8TCU3 470 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 LIPHQ8WWY8 451 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 ZNF347Q96SE7 839 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 MMADHCQ9H3L0 296 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-206ENST00000465560 FANCFQ9NPI8 374 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 PARPBPQ9NWS1 579 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 SLC7A8Q9UHI5 535 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 PRSS50Q9UI38 385 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 POMPQ9Y244 141 aa17.98■□□□□ 0.47
PTCD3-206ENST00000465560 A0A087WUU8 490 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 EBAG9O00559 213 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 HPRP00739 348 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 UMPSP11172 480 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 LSM11P83369 360 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTCD3-206ENST00000465560 IL1RL1Q01638 556 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 FLOT2Q14254 428 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 ZNF730Q6ZMV8 503 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 Q6ZT83 130 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 MBOAT2Q6ZWT7 520 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 NRMQ8IXM6 262 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 GABRG1Q8N1C3 465 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 LRRC17Q8N6Y2 441 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 SLC24A3Q9HC58 644 aa17.97■□□□□ 0.47
PTCD3-206ENST00000465560 ALPK2Q86TB3 2170 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 HNRNPRO43390 633 aaKnown RBP17.96■□□□□ 0.47
PTCD3-206ENST00000465560 HIST1H2ABP04908 130 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 ADORA3P0DMS8 318 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 IFI30P13284 250 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 FUT1P19526 365 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 CCKARP32238 428 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 UGT2B10P36537 528 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 SMIM11AP58511 58 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 SPIBQ01892 262 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 PRKCDQ05655 676 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 CHRNB3Q05901 458 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 SNTB1Q13884 538 aaKnown RBP17.96■□□□□ 0.47
PTCD3-206ENST00000465560 C1DQ13901 141 aaKnown RBP17.96■□□□□ 0.47
PTCD3-206ENST00000465560 FAM98BQ52LJ0 330 aaKnown RBP17.96■□□□□ 0.47
PTCD3-206ENST00000465560 FGD3Q5JSP0 725 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 ZNF787Q6DD87 383 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 PODNL1Q6PEZ8 512 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 HIST3H2AQ7L7L0 130 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 AAED1Q7RTV5 226 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 NANOGNBQ7Z5D8 188 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 UEVLDQ8IX04 471 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 HIST1H2ACQ93077 130 aa17.96■□□□□ 0.47
PTCD3-206ENST00000465560 BPIFA2Q96DR5 249 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms