RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 OPN1MW2P0DN77 364 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 OPN1MW3P0DN78 364 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 FUT3P21217 361 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 CHMLP26374 656 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 CCNHP51946 323 aaPredicted RBP2.57□□□□□ -2
HMGXB4-205ENST00000464480 ATP1B3P54709 279 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 TLE4Q04727 773 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 HERPUD1Q15011 391 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 NSDHLQ15738 373 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 SNCBQ16143 134 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 CEP55Q53EZ4 464 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 DMRTC1Q5HYR2 192 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 CCDC183Q5T5S1 534 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 TIGD3Q6B0B8 471 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 NANOGNBQ7Z5D8 188 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 TGIF2LXQ8IUE1 241 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 ZNF740Q8NDX6 193 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 NEIL3Q8TAT5 605 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 SCFD1Q8WVM8 642 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 ZNF606Q8WXB4 792 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 UFD1Q92890 307 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 FGF11Q92914 225 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 UCN3Q969E3 161 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 PAGE5Q96GU1 130 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 TIMD4Q96H15 378 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 PLEKHF1Q96S99 279 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 CENPHQ9H3R5 247 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 NCOR1P1Q9H4R4 102 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 AZI2Q9H6S1 392 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 SLC25A22Q9H936 323 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 SGK2Q9HBY8 427 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 POLE4Q9NR33 117 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 AIG1Q9NVV5 245 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 EMC3Q9P0I2 261 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 KIF25Q9UIL4 384 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 CELA1Q9UNI1 258 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 PLEKHG1Q9ULL1 1385 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 NCAPD3P42695 1498 aa2.57□□□□□ -2
HMGXB4-205ENST00000464480 TCRBV9S1A1TA0A576 114 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 A6NIZ1 184 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 SNTNA6NMZ2 147 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 TRIM49D1C9J1S8 452 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 LOC110117498-PIK3R3F6TDL0 507 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 NBR2O15453 112 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 YKT6O15498 198 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 TIMM8AO60220 97 aaPredicted RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 B4GALT2O60909 372 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 OXSR1O95747 527 aaPredicted RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 PAHP00439 452 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 P04436 131 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 HPNP05981 417 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 ELK1P19419 428 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 S100A1P23297 94 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 COX7A1P24310 79 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 U2AF2P26368 475 aaKnown RBP eCLIP2.56□□□□□ -2
HMGXB4-205ENST00000464480 CD1BP29016 333 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 PRDX3P30048 256 aaKnown RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 RBMXP38159 391 aaKnown RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 KIR2DS4P43632 304 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 HLCSP50747 726 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 KPNA2P52292 529 aaKnown RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 APOC4P55056 127 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 RAP1BP61224 184 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 RPS14P62263 151 aaKnown RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 MRPS15P82914 257 aaKnown RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 VGLL4Q14135 290 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 OXA1LQ15070 435 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 ZMYND11Q15326 602 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 DUSP7Q16829 419 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 CCDC153Q494R4 210 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 CAVIN4Q5BKX8 364 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 C1orf100Q5SVJ3 147 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 OR2G6Q5TZ20 316 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 Q6ZN92 141 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 RNF165Q6ZSG1 346 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 ZNF571Q7Z3V5 609 aaPredicted RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 SPATA24Q86W54 205 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 OR10G3Q8NGC4 313 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 OR4K14Q8NGD5 310 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 OR52K2Q8NGK3 314 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 MAGEE2Q8TD90 523 aaPredicted RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 SHC3Q92529 594 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 C10orf35Q96D05 121 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 SNF8Q96H20 258 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 CATSPER2Q96P56 530 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 ALS2CR12Q96Q35 445 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 MTMR9Q96QG7 549 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 TSG101Q99816 390 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 P2RY13Q9BPV8 354 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 RIOK1Q9BRS2 568 aaKnown RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 NAT9Q9BTE0 207 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 GCOM2Q9BZD3 368 aaPredicted RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 C8orf33Q9H7E9 229 aaPredicted RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 FN3KRPQ9HA64 309 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 PARVBQ9HBI1 364 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 THUMPD1Q9NXG2 353 aaKnown RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 ANAPC11Q9NYG5 84 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 CAB39Q9Y376 341 aaPredicted RBP2.56□□□□□ -2
HMGXB4-205ENST00000464480 MAP3K5Q99683 1374 aa2.56□□□□□ -2
HMGXB4-205ENST00000464480 ADAMTS9Q9P2N4 1935 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms