RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CPSF4O95639 269 aaKnown RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 HPXP02790 462 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 KRT4P19013 534 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 CHI3L1P36222 383 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 P2RY4P51582 365 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 LMO4P61968 165 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 EPS8Q12929 822 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 ANXA8L1Q5VT79 327 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 ACSM5Q6NUN0 579 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 C1orf229Q6ZS94 237 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 MDP1Q86V88 176 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 LSRQ86X29 649 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 EPHX4Q8IUS5 362 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF440Q8IYI8 595 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 GPR137CQ8N3F9 429 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 RIBC1Q8N443 379 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 BPIFB2Q8N4F0 458 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 TRNT1Q96Q11 434 aaKnown RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF416Q9BWM5 594 aa12.45□□□□□ -0.42
SMC1A-204ENST00000463684 MRPL37Q9BZE1 423 aaKnown RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 MTHFD2LQ9H903 347 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF275Q9NSD4 429 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 MARCOQ9UEW3 520 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-204ENST00000463684 PRSS51A0A1B0GVH4 220 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 GSNP06396 782 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 TFPTP0C1Z6 253 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF43P17038 809 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 ALDH3B1P43353 468 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 CLDN17P56750 224 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 COPZ1P61923 177 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 EMX2Q04743 252 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 BNIP2Q12982 314 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 SAXO2Q658L1 398 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 C1QL2Q7Z5L3 287 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 CADM2Q8N3J6 435 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 OR8J2Q8NGG1 315 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 NANPQ8TBE9 248 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 NEURL3Q96EH8 262 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 SLC6A7Q99884 636 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 SYT3Q9BQG1 590 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 GPR35Q9HC97 309 aa12.44□□□□□ -0.42
SMC1A-204ENST00000463684 DDX28Q9NUL7 540 aaKnown RBP12.44□□□□□ -0.42
SMC1A-204ENST00000463684 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
SMC1A-204ENST00000463684 PKD1L1Q8TDX9 2849 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 A0A0G2JMP0 313 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 A0A0X1KG70 313 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 PRAMEF27A3QJZ7 478 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 HMGN4O00479 90 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 FRS3O43559 492 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF432O94892 652 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 AVPP01185 164 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
SMC1A-204ENST00000463684 FPR2P25090 351 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 ALDH3A1P30838 453 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 ANXA11P50995 505 aaKnown RBP12.43□□□□□ -0.42
SMC1A-204ENST00000463684 SEC24CP53992 1094 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 MRPS11P82912 194 aaKnown RBP12.43□□□□□ -0.42
SMC1A-204ENST00000463684 SYPL1Q16563 259 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 CEACAM16Q2WEN9 425 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 TRMT5Q32P41 509 aaKnown RBP12.43□□□□□ -0.42
SMC1A-204ENST00000463684 MRPL2Q5T653 305 aaKnown RBP12.43□□□□□ -0.42
SMC1A-204ENST00000463684 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
SMC1A-204ENST00000463684 C1orf140Q5VVS0 124 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 WBP2NLQ6ICG8 309 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 TREML4Q6UXN2 200 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 LRRC74BQ6ZQY2 392 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 ANKRD46Q86W74 232 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 IFT20Q8IY31 132 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 C4orf33Q8N1A6 199 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 ANKFN1Q8N957 763 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 OR4M2Q8NGB6 313 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 YIPF5Q969M3 257 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 SLC35A5Q9BS91 424 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 SLC38A1Q9H2H9 487 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 NTN4Q9HB63 628 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 G6PC2Q9NQR9 355 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 RCE1Q9Y256 329 aa12.43□□□□□ -0.42
SMC1A-204ENST00000463684 A0A0G2JK05 382 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF503-AS2A6NEH8 195 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 SMIM23A6NLE4 172 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 J3QLI3 93 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 MPZL1O95297 269 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 AHSA1O95433 338 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 GKN3PP0CG01 181 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 HKR1P10072 659 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 CD79AP11912 226 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 GTF2E2P29084 291 aaKnown RBP12.42□□□□□ -0.42
SMC1A-204ENST00000463684 GLRXP35754 106 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
SMC1A-204ENST00000463684 UBA52P62987 128 aaKnown RBP12.42□□□□□ -0.42
SMC1A-204ENST00000463684 GALK2Q01415 458 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 C1DQ13901 141 aaKnown RBP12.42□□□□□ -0.42
SMC1A-204ENST00000463684 PDCD2Q16342 344 aaPredicted RBP12.42□□□□□ -0.42
SMC1A-204ENST00000463684 PEX5LQ8IYB4 626 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 GSPT2Q8IYD1 628 aaKnown RBP12.42□□□□□ -0.42
SMC1A-204ENST00000463684 KDM8Q8N371 416 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 ZDHHC22Q8N966 263 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms