RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ZNF610Q8N9Z0 462 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 APH1AQ96BI3 265 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 OXGR1Q96P68 337 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 MOGAT1Q96PD6 335 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 YY1AP1Q9H869 796 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 GALNT8Q9NY28 637 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 ING1Q9UK53 422 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-204ENST00000463487 TMEM5Q9Y2B1 443 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 FLVCR1Q9Y5Y0 555 aa17.59■□□□□ 0.41
COL9A3-204ENST00000463487 RAMP1O60894 148 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 OR7A10O76100 309 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 CNOT4O95628 575 aaKnown RBP17.58■□□□□ 0.4
COL9A3-204ENST00000463487 RAP2AP10114 183 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 COX6B1P14854 86 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 POU2F1P14859 743 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 OR3A2P47893 321 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 TAF11Q15544 211 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 CASP12Q6UXS9 341 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 TFAP2EQ6VUC0 442 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 MBOAT2Q6ZWT7 520 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 PIWIL3Q7Z3Z3 882 aaKnown RBP17.58■□□□□ 0.4
COL9A3-204ENST00000463487 NUFIP2Q7Z417 695 aaKnown RBP17.58■□□□□ 0.4
COL9A3-204ENST00000463487 UEVLDQ8IX04 471 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 PFN4Q8NHR9 129 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 TMEM45BQ96B21 275 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 BPIFA2Q96DR5 249 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 MEPEQ9NQ76 525 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-204ENST00000463487 MAN2C1Q9NTJ4 1040 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-204ENST00000463487 SLC7A8Q9UHI5 535 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 TESMINQ9Y4I5 508 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 NOX1Q9Y5S8 564 aa17.58■□□□□ 0.4
COL9A3-204ENST00000463487 LOC102725191A0A1B0GVB3 256 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 DHRS12A0PJE2 317 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 OR6C65A6NJZ3 312 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 KRT36O76013 467 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 ADORA3P0DMS8 318 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 IFI30P13284 250 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 P2RY4P51582 365 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 EXOC3L2Q2M3D2 409 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 SP5Q6BEB4 398 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-204ENST00000463487 AAED1Q7RTV5 226 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 TSEN54Q7Z6J9 526 aaKnown RBP17.57■□□□□ 0.4
COL9A3-204ENST00000463487 ZNF775Q96BV0 537 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-204ENST00000463487 DHRS1Q96LJ7 313 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 NDEL1Q9GZM8 345 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 NPDC1Q9NQX5 325 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-204ENST00000463487 TMCC3Q9ULS5 477 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 AURKCQ9UQB9 309 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 ICE1Q9Y2F5 2266 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 BAHCC1Q9P281 2608 aa17.57■□□□□ 0.4
COL9A3-204ENST00000463487 SPTAN1Q13813 2472 aaKnown RBP17.56■□□□□ 0.4
COL9A3-204ENST00000463487 A0A087WUU8 490 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 PLPP3O14495 311 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 DIRAS1O95057 198 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 SAGP10523 405 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-204ENST00000463487 FUT1P19526 365 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 AHCYP23526 432 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 GRNP28799 593 aaKnown RBP17.56■□□□□ 0.4
COL9A3-204ENST00000463487 RRM2P31350 389 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 IFNGR2P38484 337 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 CD79BP40259 229 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 MAGEA2P43356 314 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 C1orf146Q5VVC0 180 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 MEX3BQ6ZN04 569 aaKnown RBP17.56■□□□□ 0.4
COL9A3-204ENST00000463487 CREB3L2Q70SY1 520 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 ABHD12BQ7Z5M8 362 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-204ENST00000463487 PXKQ7Z7A4 578 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 NRMQ8IXM6 262 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 UBE2J2Q8N2K1 259 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 ANKK1Q8NFD2 765 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 SLC7A13Q8TCU3 470 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 LIPHQ8WWY8 451 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 RSRC1Q96IZ7 334 aaKnown RBP17.56■□□□□ 0.4
COL9A3-204ENST00000463487 SPOCK3Q9BQ16 436 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 RCE1Q9Y256 329 aa17.56■□□□□ 0.4
COL9A3-204ENST00000463487 EFCAB9A8MZ26 197 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 LRRN3E7EW58 273 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 ASAH2BP0C7U1 165 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 SLC9A3P48764 834 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 PRKCDQ05655 676 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 LTBQ06643 244 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 P2RY6Q15077 328 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 ANKDD1AQ495B1 522 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 PODNL1Q6PEZ8 512 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 ZNF474Q6S9Z5 364 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-204ENST00000463487 Q6ZT83 130 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 SLC46A3Q7Z3Q1 461 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 POMGNT2Q8NAT1 580 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 OR52J3Q8NH60 311 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 HDHD5Q9BXW7 423 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 ENKD1Q9H0I2 346 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 UPB1Q9UBR1 384 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 SEC14L4Q9UDX3 406 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 NDRG3Q9UGV2 375 aa17.55■□□□□ 0.4
COL9A3-204ENST00000463487 HCFC1P51610 2035 aa17.54■□□□□ 0.4
COL9A3-204ENST00000463487 C16orf97H3BN30 126 aa17.54■□□□□ 0.4
COL9A3-204ENST00000463487 BLOC1S5-TXNDC5H3BN57 136 aa17.54■□□□□ 0.4
COL9A3-204ENST00000463487 RNF13O43567 381 aa17.54■□□□□ 0.4
COL9A3-204ENST00000463487 KRT33AO76009 404 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms