RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PLK3Q9H4B4 646 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 ZNF385DQ9H6B1 395 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 MEAF6Q9HAF1 191 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 TMEM181Q9P2C4 612 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 OSGIN1Q9UJX0 560 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 SLC9A8Q9Y2E8 581 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 ZNF503-AS2A6NEH8 195 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 DNPH1O43598 174 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 CHEK2O96017 543 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 CECR9P0C854 216 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 PTDSS1P48651 473 aaKnown RBP13.6□□□□□ -0.23
SND1-203ENST00000463020 ATP4BP51164 291 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 HGFACQ04756 655 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 TBRG1Q3YBR2 411 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 FAM174BQ3ZCQ3 159 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 AP1ARQ63HQ0 302 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 C16orf62Q7Z3J2 963 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 ANKRD46Q86W74 232 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 TMEM99Q8N816 258 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 FNDC5Q8NAU1 212 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 MOAP1Q96BY2 351 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 PPP3R2Q96LZ3 170 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 SAP130Q9H0E3 1048 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 ATAD3AQ9NVI7 634 aa13.6□□□□□ -0.23
SND1-203ENST00000463020 TMEFF2Q9UIK5 374 aaPredicted RBP13.6□□□□□ -0.23
SND1-203ENST00000463020 SPIN1Q9Y657 262 aaPredicted RBP13.6□□□□□ -0.23
SND1-203ENST00000463020 TMEM129A0AVI4 362 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 AIM2O14862 343 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 UBDO15205 165 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 SPRY1O43609 319 aaPredicted RBP13.59□□□□□ -0.23
SND1-203ENST00000463020 SCN2BO60939 215 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 RGS9O75916 674 aaPredicted RBP13.59□□□□□ -0.23
SND1-203ENST00000463020 AKR7A3O95154 331 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 TACSTD2P09758 323 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 DAOP14920 347 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 GIFP27352 417 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 APEX1P27695 318 aaKnown RBP13.59□□□□□ -0.23
SND1-203ENST00000463020 TACR3P29371 465 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 RPL3P39023 403 aaKnown RBP13.59□□□□□ -0.23
SND1-203ENST00000463020 NUDT2P50583 147 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 P2RY4P51582 365 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 STX1BP61266 288 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 NAAAQ02083 359 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 CCNIQ14094 377 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 MSMPQ1L6U9 139 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 PGM2L1Q6PCE3 622 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 SVOPLQ8N434 492 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 OR1K1Q8NGR3 316 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 MIPOL1Q8TD10 442 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 XAGE5Q8WWM1 108 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 TMEM45BQ96B21 275 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 ROPN1LQ96C74 230 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 AURKBQ96GD4 344 aaPredicted RBP13.59□□□□□ -0.23
SND1-203ENST00000463020 CLPTM1LQ96KA5 538 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 ALKBH3Q96Q83 286 aaPredicted RBP13.59□□□□□ -0.23
SND1-203ENST00000463020 TRAPPC4Q9Y296 219 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 WDR45Q9Y484 360 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 LRRC42Q9Y546 428 aa13.59□□□□□ -0.23
SND1-203ENST00000463020 TGP01266 2768 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 A0A096LPE4 126 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 A0A1W2PPZ6 126 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 B9A039 149 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 ANKRD28O15084 1053 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 AK1P00568 194 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 EGR1P18146 543 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 PRPS1L1P21108 318 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 MAPK1P28482 360 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 THBS4P35443 961 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 SELENOPP49908 381 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 PPOXP50336 477 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 IDH3GP51553 393 aaPredicted RBP13.58□□□□□ -0.24
SND1-203ENST00000463020 CDH15P55291 814 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 SLC35A1P78382 337 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 KCNJ10P78508 379 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 EFNB3Q15768 340 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 OTUD3Q5T2D3 398 aaPredicted RBP13.58□□□□□ -0.24
SND1-203ENST00000463020 ANKRD16Q6P6B7 361 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 C12orf54Q6X4T0 127 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 LRRC74BQ6ZQY2 392 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 AAED1Q7RTV5 226 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 CARM1Q86X55 608 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 CDK20Q8IZL9 346 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 PGAM4Q8N0Y7 254 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 ANKFN1Q8N957 763 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 OR4A15Q8NGL6 344 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 DNAJC9Q8WXX5 260 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
SND1-203ENST00000463020 BOD1Q96IK1 185 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 VCX3BQ9H321 246 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 EXOSC3Q9NQT5 275 aaKnown RBP13.58□□□□□ -0.24
SND1-203ENST00000463020 SLC35A3Q9Y2D2 325 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 DYSFO75923 2080 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 CMYA5Q8N3K9 4069 aa13.58□□□□□ -0.24
SND1-203ENST00000463020 LIPT2A6NK58 231 aa13.57□□□□□ -0.24
SND1-203ENST00000463020 UPK3AO75631 287 aa13.57□□□□□ -0.24
SND1-203ENST00000463020 WNT11O96014 354 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms