RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PMS2P3Q13401 168 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 KPNB1Q14974 876 aaKnown RBP10.49□□□□□ -0.73
CPNE1-221ENST00000462352 EXOC3L2Q2M3D2 409 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 TMEM201Q5SNT2 666 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 EEF1A1P5Q5VTE0 462 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 NUFIP2Q7Z417 695 aaKnown RBP10.49□□□□□ -0.73
CPNE1-221ENST00000462352 GPAT4Q86UL3 456 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 KDM8Q8N371 416 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 RELL2Q8NC24 303 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-221ENST00000462352 OR4K5Q8NGD3 323 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 OR6K3Q8NGY3 331 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 LIPHQ8WWY8 451 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 STARD4Q96DR4 205 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 DUS3LQ96G46 650 aaKnown RBP10.49□□□□□ -0.73
CPNE1-221ENST00000462352 ALPK1Q96QP1 1244 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 TACO1Q9BSH4 297 aaKnown RBP10.49□□□□□ -0.73
CPNE1-221ENST00000462352 SF3B5Q9BWJ5 86 aaKnown RBP10.49□□□□□ -0.73
CPNE1-221ENST00000462352 UCK2Q9BZX2 261 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 YY1AP1Q9H869 796 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 VNN3Q9NY84 501 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 EMC3Q9P0I2 261 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 TMCC3Q9ULS5 477 aa10.49□□□□□ -0.73
CPNE1-221ENST00000462352 ERICH4A6NGS2 130 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 FAM90A27PA6NNH2 459 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 MS4A18H0YCH9 400 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 PLPP3O14495 311 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 GPR171O14626 319 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 TIPRLO75663 272 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 HPRP00739 348 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 CGAP01215 116 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 HIST1H2ABP04908 130 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 PUDPQ08623 228 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 PPP1R8Q12972 351 aaKnown RBP10.48□□□□□ -0.73
CPNE1-221ENST00000462352 POU4F3Q15319 338 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 MS4A18Q3C1V0 323 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 SLC25A35Q3KQZ1 300 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 HIST3H2AQ7L7L0 130 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 NANOGNBQ7Z5D8 188 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 BTLAQ7Z6A9 289 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 GALNT5Q7Z7M9 940 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 MEX3DQ86XN8 651 aaKnown RBP10.48□□□□□ -0.73
CPNE1-221ENST00000462352 CDK20Q8IZL9 346 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 ZIC4Q8N9L1 334 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 OR9K2Q8NGE7 335 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 OR4C15Q8NGM1 316 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 HIST1H2ACQ93077 130 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 FAM46AQ96IP4 442 aaKnown RBP10.48□□□□□ -0.73
CPNE1-221ENST00000462352 OXGR1Q96P68 337 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 PIGMQ9H3S5 423 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 DENND2DQ9H6A0 471 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-221ENST00000462352 C12orf49Q9H741 205 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 REEP1Q9H902 201 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 ARMC1Q9NVT9 282 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 B3GAT1Q9P2W7 334 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 PROCRQ9UNN8 238 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 TMEM5Q9Y2B1 443 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 SAMHD1Q9Y3Z3 626 aaKnown RBP10.48□□□□□ -0.73
CPNE1-221ENST00000462352 FLVCR1Q9Y5Y0 555 aa10.48□□□□□ -0.73
CPNE1-221ENST00000462352 INTS1Q8N201 2190 aaKnown RBP10.48□□□□□ -0.73
CPNE1-221ENST00000462352 LOC102725191A0A1B0GVB3 256 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 NKX2-6A6NCS4 301 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 EFCAB9A8MZ26 197 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 EEF1E1-BLOC1S5C9J1V9 151 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 BLOC1S5-TXNDC5H3BN57 136 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 GNGT2O14610 69 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 CDC42EP2O14613 210 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 EEF1E1O43324 174 aaKnown RBP10.47□□□□□ -0.73
CPNE1-221ENST00000462352 OR10H3O60404 316 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 SMNDC1O75940 238 aaKnown RBP eCLIP10.47□□□□□ -0.731e-15■■■■□ 21.1
CPNE1-221ENST00000462352 OR6A2O95222 327 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 ADORA3P0DMS8 318 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 SAGP10523 405 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-221ENST00000462352 CD8BP10966 210 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 ZNF43P17038 809 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 AHCYP23526 432 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 GPR4P46093 362 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 OMPP47874 163 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 IL1RL1Q01638 556 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 ZP4Q12836 540 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 LAPTM4AQ15012 233 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 TMPRSS11FQ6ZWK6 438 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 ZER1Q7Z7L7 766 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 LUZP2Q86TE4 346 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 EPHX4Q8IUS5 362 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 ZNF385AQ96PM9 386 aaKnown RBP10.47□□□□□ -0.73
CPNE1-221ENST00000462352 OPN3Q9H1Y3 402 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-221ENST00000462352 KRCC1Q9NPI7 259 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-221ENST00000462352 FANCFQ9NPI8 374 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 KCNJ16Q9NPI9 418 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 PLSCR4Q9NRQ2 329 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 TAS2R5Q9NYW4 299 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 JKAMPQ9P055 326 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 DNAJB9Q9UBS3 223 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 NOSIPQ9Y314 301 aaKnown RBP10.47□□□□□ -0.73
CPNE1-221ENST00000462352 AP4S1Q9Y587 144 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 U3KQV3 271 aa10.47□□□□□ -0.73
CPNE1-221ENST00000462352 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 C11orf98E9PRG8 122 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 MSTNO14793 375 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms