RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 STX17P56962 302 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 PLP1P60201 277 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 ERVK-25P63136 954 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 TGFBR3Q03167 851 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 ENPEPQ07075 957 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 SRSF5Q13243 272 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 ORC2Q13416 577 aaPredicted RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 NSDHLQ15738 373 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 ATP6AP1Q15904 470 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 KLF17Q5JT82 389 aaPredicted RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 CARD17Q5XLA6 110 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 SPINK14Q6IE38 97 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 C11orf71Q6IPW1 123 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 PSTKQ8IV42 348 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 LINC00612Q8N6U2 182 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 TPRX1Q8N7U7 411 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 OR2L5Q8NG80 312 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 OR51S1Q8NGJ8 323 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 CHCHD10Q8WYQ3 142 aaPredicted RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 DCUN1D4Q92564 292 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 C16orf74Q96GX8 76 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 C12orf42Q96LP6 360 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 P2RY13Q9BPV8 354 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 HES7Q9BYE0 225 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 ROGDIQ9GZN7 287 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 NIPAL2Q9H841 368 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 SLC25A22Q9H936 323 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 GIN1Q9NXP7 522 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 PISDQ9UG56 409 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 NUP50Q9UKX7 468 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 SMAD5-AS1Q9Y6J3 95 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.32□□□□□ -2.04
VCL-203ENST00000461383 TP53BP1Q12888 1972 aaPredicted RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 TDRD6O60522 2096 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 SCN2AQ99250 2005 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 A0A075B6Q4 140 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 IGKV1D-8A0A087WSZ0 117 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 A0A0J9YXY3 114 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 ERI2A8K979 691 aaKnown RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 AGPAT2O15120 278 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 HDAC3O15379 428 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 SOX15O60248 233 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 ZNF780AO75290 641 aaPredicted RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 UPK3AO75631 287 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 OR7A10O76100 309 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 KLF8O95600 359 aaPredicted RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 TMEM50AO95807 157 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 LY6G6DO95868 133 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 GAPDHP04406 335 aaKnown RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 UBTFL1P0CB47 393 aaPredicted RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 ZNF24P17028 368 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 EIF2S2P20042 333 aaKnown RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 TBPP20226 339 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 CCNCP24863 283 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 FMO3P31513 532 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 RORAP35398 523 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 RBMXP38159 391 aaKnown RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 SYKP43405 635 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 TAS2R19P59542 299 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 CCNA1P78396 465 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 TGM3Q08188 693 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 EGFEM1PQ0D2K5 195 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 DGUOKQ16854 277 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 VPS26BQ4G0F5 336 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 XKR7Q5GH72 579 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 PRAMEF20Q5VT98 475 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 RAET1LQ5VY80 246 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 SCARA5Q6ZMJ2 495 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 CCDC73Q6ZRK6 1079 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 CENPQQ7L2Z9 268 aaPredicted RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 ZNF546Q86UE3 836 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 PRR22Q8IZ63 422 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 OR2L3Q8NG85 312 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 OR4F6Q8NGB9 312 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 OR10G3Q8NGC4 313 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 OR2G2Q8NGZ5 317 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 OR9G1Q8NH87 305 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 FAM81AQ8TBF8 368 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 FAM151AQ8WW52 585 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 UCN3Q969E3 161 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 ITCHQ96J02 903 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 SORT1Q99523 831 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 PELOQ9BRX2 385 aaKnown RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 MFFQ9GZY8 342 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 IL26Q9NPH9 171 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 TMEM9Q9P0T7 183 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 RABL2AQ9UBK7 228 aaPredicted RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 KIF25Q9UIL4 384 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 NAP1L2Q9ULW6 460 aaPredicted RBP2.31□□□□□ -2.04
VCL-203ENST00000461383 STARD10Q9Y365 291 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 NOTCH3Q9UM47 2321 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 THSD7BQ9C0I4 1608 aa2.31□□□□□ -2.04
VCL-203ENST00000461383 C9JVG2 144 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 GOSR2O14653 212 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 HCRTR1O43613 425 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 MGRN1O60291 552 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 TIMP1P01033 207 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 CST1P01037 141 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms