RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 FXNQ16595 210 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 BEX5Q5H9J7 111 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ANKRD34AQ69YU3 496 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 C20orf204Q6ZNR8 217 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 RINLQ6ZS11 566 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 H1FNTQ75WM6 255 aaPredicted RBP11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 HIST3H2AQ7L7L0 130 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 VTCN1Q7Z7D3 282 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 GPAT4Q86UL3 456 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 P3H2Q8IVL5 708 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 FAM156AQ8NDB6 213 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 STEAP2Q8NFT2 490 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 HIST1H2ACQ93077 130 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 NSMCE2Q96MF7 247 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PIP5K1AQ99755 562 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PTDSS2Q9BVG9 487 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 AMBRA1Q9C0C7 1298 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MUC13Q9H3R2 512 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 UBTD1Q9HAC8 227 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 NGBQ9NPG2 151 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TAS2R1Q9NYW7 299 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PRPF19Q9UMS4 504 aaKnown RBP11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 SNX13Q9Y5W8 968 aa11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TEP1Q99973 2627 aaKnown RBP11.73□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CELSR1Q9NYQ6 3014 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 HIVEP1P15822 2718 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 IGKV1D-42A0A075B6H8 117 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 HTR3EA5X5Y0 456 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ZNF814B7Z6K7 855 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 FTCDNL1E5RQL4 147 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 UBOX5O94941 541 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CNOT4O95628 575 aaKnown RBP11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ITGA2P17301 1181 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CD53P19397 219 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 OR3A2P47893 321 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 RASSF2P50749 326 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 NKX6-1P78426 367 aaPredicted RBP11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 IL1RL1Q01638 556 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 FOXD4Q12950 439 aaPredicted RBP11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 P2RY6Q15077 328 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 SCAIQ8N9R8 606 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ADPRHL1Q8NDY3 354 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 OR9K2Q8NGE7 335 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 POP5Q969H6 163 aaKnown RBP11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MCUR1Q96AQ8 359 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 APH1AQ96BI3 265 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PRRC1Q96M27 445 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 OXGR1Q96P68 337 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CCL19Q99731 98 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ACTR6Q9GZN1 396 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 FLVCR1Q9Y5Y0 555 aa11.72□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PRRC2AP48634 2157 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 M0R082 166 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ARPC2O15144 300 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 GYG2O15488 501 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 RAMP1O60894 148 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ATP5HO75947 161 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 OR6A2O95222 327 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 LYPD3O95274 346 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 BGLAPP02818 100 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 THY1P04216 161 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 NQO1P15559 274 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ZNF43P17038 809 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 IL32P24001 234 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 GRPRP30550 384 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MSX2P35548 267 aaPredicted RBP11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PMS2P3Q13401 168 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 C1DQ13901 141 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TRIM25Q14258 630 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TRAM2Q15035 370 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 DNAL1Q4LDG9 190 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CASP12Q6UXS9 341 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TFAP2EQ6VUC0 442 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 STAC2Q6ZMT1 411 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 Q6ZT83 130 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 LRRC75A-AS1Q8N1F1 130 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 UBE2J2Q8N2K1 259 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ZNF417Q8TAU3 575 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TMEM239Q8WW34 195 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PYURFQ96I23 114 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ZNF587Q96SQ5 575 aaPredicted RBP11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 PRSS27Q9BQR3 290 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 THTPAQ9BU02 230 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ZNF426Q9BUY5 554 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 FKRPQ9H9S5 495 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 NANSQ9NR45 359 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MRPL39Q9NYK5 338 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ACTR3BQ9P1U1 418 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 UPB1Q9UBR1 384 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MED31Q9Y3C7 131 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ENPP4Q9Y6X5 453 aa11.71□□□□□ -0.53
RAB11FIP3-207ENST00000461009 AKAP6Q13023 2319 aa11.7□□□□□ -0.54
RAB11FIP3-207ENST00000461009 LOC102725191A0A1B0GVB3 256 aa11.7□□□□□ -0.54
RAB11FIP3-207ENST00000461009 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
RAB11FIP3-207ENST00000461009 AKAP8O43823 692 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms