RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SELENONQ9NZV5 590 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 KLHL14Q9P2G3 628 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 A0A087WUJ7 227 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 OR6C65A6NJZ3 312 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 ZNF587BE7ETH6 402 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 M0R3H8 397 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 AIM2O14862 343 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 KRT33AO76009 404 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 CD8AP01732 235 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 TROVE2P10155 538 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL5A1-203ENST00000460264 GRPRP30550 384 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 PCGF2P35227 344 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 CDKN1AP38936 164 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 OR1Q1Q15612 314 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 NRF1Q16656 503 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 TRMT5Q32P41 509 aaKnown RBP16.57■□□□□ 0.24
COL5A1-203ENST00000460264 SWT1Q5T5J6 900 aaKnown RBP16.57■□□□□ 0.24
COL5A1-203ENST00000460264 CGB2Q6NT52 195 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 SLC22A25Q6T423 547 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 CLEC9AQ6UXN8 241 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 Q71RC1 249 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-203ENST00000460264 LINGO2Q7L985 606 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 SLC30A8Q8IWU4 369 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 GPR32P1Q8NGA4 272 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 RNF217Q8TC41 542 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 TRMT61AQ96FX7 289 aaKnown RBP16.57■□□□□ 0.24
COL5A1-203ENST00000460264 OXGR1Q96P68 337 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 ARHGDIGQ99819 225 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 GRIP2Q9C0E4 1043 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 RCE1Q9Y256 329 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 B3GALT5Q9Y2C3 310 aa16.57■□□□□ 0.24
COL5A1-203ENST00000460264 FAM171A2A8MVW0 826 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 E7EQL1 145 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 M0QX08 132 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 SMAD7O15105 426 aaKnown RBP16.56■□□□□ 0.24
COL5A1-203ENST00000460264 UPK3AO75631 287 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 LGI1O95970 557 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 HEXAP06865 529 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 ZNF43P17038 809 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 HOXB4P17483 251 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-203ENST00000460264 CLDN17P56750 224 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 PRPS1P60891 318 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 DUSP7Q16829 419 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 HIKESHIQ53FT3 197 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 KLHL24Q6TFL4 600 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 B3GLCTQ6Y288 498 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 H1FNTQ75WM6 255 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-203ENST00000460264 ADPRHL1Q8NDY3 354 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 OR1K1Q8NGR3 316 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 OR6S1Q8NH40 331 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 OR10A6Q8NH74 314 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 LINC00470Q9BZP3 86 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 ALG2Q9H553 416 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 POU2F3Q9UKI9 436 aa16.56■□□□□ 0.24
COL5A1-203ENST00000460264 FXYD1O00168 92 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 TRAF3IP2O43734 574 aaPredicted RBP16.55■□□□□ 0.24
COL5A1-203ENST00000460264 FMO6PO60774 539 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 ZNF432O94892 652 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 WNT11O96014 354 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 C8BP07358 591 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 PTNP21246 168 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 CBLP22681 906 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 GZMMP51124 257 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 CDH12P55289 794 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 LTBQ06643 244 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 NPTX1Q15818 432 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 ETFDHQ16134 617 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 PATL1Q86TB9 770 aaKnown RBP16.55■□□□□ 0.24
COL5A1-203ENST00000460264 TAMM41Q96BW9 452 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 EPYCQ99645 322 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 MCHR1Q99705 422 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 TMEM43Q9BTV4 400 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 MRGBPQ9NV56 204 aa16.55■□□□□ 0.24
COL5A1-203ENST00000460264 FN1P02751 2386 aaKnown RBP16.55■□□□□ 0.24
COL5A1-203ENST00000460264 LOC102725191A0A1B0GVB3 256 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 LY6G6DO95868 133 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 IGHV4-39P01824 125 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 BGLAPP02818 100 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 CD247P20963 164 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 ARFIP2P53365 341 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 ROR2Q01974 943 aaKnown RBP16.54■□□□□ 0.24
COL5A1-203ENST00000460264 SF3A3Q12874 501 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL5A1-203ENST00000460264 KLF10Q13118 480 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 C1DQ13901 141 aaKnown RBP16.54■□□□□ 0.24
COL5A1-203ENST00000460264 CYLC2Q14093 348 aaPredicted RBP16.54■□□□□ 0.24
COL5A1-203ENST00000460264 MFSD13AQ14CX5 517 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 TBRG1Q3YBR2 411 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 RABL3Q5HYI8 236 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 NANOGP8Q6NSW7 305 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 ZNF613Q6PF04 617 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 DEPDC4Q8N2C3 294 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 OR6T1Q8NGN1 323 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 BCL2L2Q92843 193 aaPredicted RBP16.54■□□□□ 0.24
COL5A1-203ENST00000460264 SLC41A3Q96GZ6 507 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 MOGAT1Q96PD6 335 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 DHRS9Q9BPW9 319 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 NANOGQ9H9S0 305 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 OBP2BQ9NPH6 170 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 SAR1AQ9NR31 198 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 CORINQ9Y5Q5 1042 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms