RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DUX4L7P0CJ90 424 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ELNP15502 786 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 BDKRB2P30411 391 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 SNRPNP63162 240 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 MRPS10P82664 201 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 POU4F2Q12837 409 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 FAM209BQ5JX69 171 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ABHD17CQ6PCB6 329 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 STAC2Q6ZMT1 411 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 OR4N5Q8IXE1 308 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DND1Q8IYX4 353 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 NRSN1Q8IZ57 195 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 RNF113BQ8IZP6 322 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 SYS1Q8N2H4 156 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 OR2L13Q8N349 312 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 CAMKVQ8NCB2 501 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 OR2T27Q8NH04 317 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 OR14A16Q8NHC5 309 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 SLC2A12Q8TD20 617 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 C10orf90Q96M02 699 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF471Q9BX82 626 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 POFUT1Q9H488 388 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 EXO5Q9H790 373 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 CACYBPQ9HB71 228 aaKnown RBP9.45□□□□□ -0.9
CLIP4-208ENST00000456385 BIN3Q9NQY0 253 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 DUX4Q9UBX2 424 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 KLF15Q9UIH9 416 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 MED31Q9Y3C7 131 aa9.45□□□□□ -0.9
CLIP4-208ENST00000456385 TBC1D3EA0A087X179 549 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 TRAV20A0A0B4J274 112 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 A0A1B0GVT2 93 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 PQLC2LA1A4F0 135 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 H7C417 338 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 KCNAB3O43448 404 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 EIF3GO75821 320 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 CD3DP04234 171 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 NGFRP08138 427 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 C6P13671 934 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 GTF2F2P13984 249 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 EFNB2P52799 333 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 PPIAP62937 165 aaKnown RBP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 FHL1Q13642 323 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 KCNAB1Q14722 419 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 AMZ1Q400G9 498 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 AMZ2Q86W34 360 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 TMPRSS12Q86WS5 348 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 BEST3Q8N1M1 668 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 SVBPQ8N300 66 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 OR6N1Q8NGY5 312 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 SDF2Q99470 211 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 NKX3-1Q99801 234 aaPredicted RBP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 KCNK15Q9H427 330 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 APMAPQ9HDC9 416 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 PRSS16Q9NQE7 514 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 SLC22A11Q9NSA0 550 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ASF1BQ9NVP2 202 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 MTFP1Q9UDX5 166 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF346Q9UL40 294 aaKnown RBP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF281Q9Y2X9 895 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ADAM18Q9Y3Q7 739 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 CXorf51AA0A1B0GTR3 108 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 OR5H14A6NHG9 310 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 TMEM200CA6NKL6 621 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 OR6C76A6NM76 312 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 GNB5O14775 395 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 LATO43561 262 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 MAS1P04201 325 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 RPN2P04844 631 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 CRYBA1P05813 215 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 LAMP2P13473 410 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 FAUP35544 74 aaKnown RBP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 RFC3P40938 356 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 CAPZA2P47755 286 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 LTBQ06643 244 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 DNM1P46Q6ZS02 220 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 TMED4Q7Z7H5 227 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 IFNL1Q8IU54 200 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 TCEAL8Q8IYN2 117 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 OR6K6Q8NGW6 343 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 NANPQ8TBE9 248 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ZPLD1Q8TCW7 415 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 SFT2D1Q8WV19 159 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ING5Q8WYH8 240 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 RNF166Q96A37 237 aaPredicted RBP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 VRK1Q99986 396 aaPredicted RBP9.44□□□□□ -0.9
CLIP4-208ENST00000456385 PIGMQ9H3S5 423 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 TRPV4Q9HBA0 871 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 FBXO4Q9UKT5 387 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ICAM5Q9UMF0 924 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 EDARQ9UNE0 448 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 GPR34Q9UPC5 381 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF780BQ9Y6R6 833 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 KIAA1549LQ6ZVL6 1849 aa9.44□□□□□ -0.9
CLIP4-208ENST00000456385 SCN3AQ9NY46 2000 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 A0A1B0GTH9 108 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 KANTRA0A1W2PQU2 76 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 DUXAA6NLW8 204 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms