RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 SPNS3Q6ZMD2 512 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 RD3Q7Z3Z2 195 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 TSEN54Q7Z6J9 526 aaKnown RBP7.02□□□□□ -1.28
HDAC9-218ENST00000456174 ZNF227Q86WZ6 799 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 FAM129CQ86XR2 697 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 OR6V1Q8N148 313 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 ARIH2OSQ8N7S6 290 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 LINC01555Q8NAE3 123 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 GATAD2BQ8WXI9 593 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 RAB24Q969Q5 203 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 TSACCQ96A04 125 aaPredicted RBP7.02□□□□□ -1.28
HDAC9-218ENST00000456174 KCTD12Q96CX2 325 aaKnown RBP7.02□□□□□ -1.28
HDAC9-218ENST00000456174 FBXO17Q96EF6 278 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 OR2M4Q96R27 311 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 TAAR9Q96RI9 348 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 NIPSNAP1Q9BPW8 284 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 UTP23Q9BRU9 249 aaKnown RBP7.02□□□□□ -1.28
HDAC9-218ENST00000456174 CHST5Q9GZS9 411 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 TLNRD1Q9H1K6 362 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 PELI2Q9HAT8 420 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 SERHLQ9NQF3 203 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 MIEF1Q9NQG6 463 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 DMRT3Q9NQL9 472 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 C1GALT1Q9NS00 363 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 USP36Q9P275 1121 aaKnown RBP7.02□□□□□ -1.28
HDAC9-218ENST00000456174 KCNIP3Q9Y2W7 256 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 MMACHCQ9Y4U1 282 aa7.02□□□□□ -1.28
HDAC9-218ENST00000456174 PLXND1Q9Y4D7 1925 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 GNG14A0A1W2PPG7 69 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 SNRPGP15A8MWD9 76 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 RDH16O75452 317 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 KHDRBS3O75525 346 aaKnown RBP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 SPDEFO95238 335 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 IL5P05113 134 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 HOXB5P09067 269 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 GKN3PP0CG01 181 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 HOXA5P20719 270 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 TIA1P31483 386 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 AKT2P31751 481 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 CNR2P34972 360 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 KIR3DL1P43629 444 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 RAB28P51157 221 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 DGKEP52429 567 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 PNLIPRP2P54317 469 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 WNT4P56705 351 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 HSD11B2P80365 405 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 GLO1Q04760 184 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 SRSF11Q05519 484 aaKnown RBP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 GAGE1Q13065 139 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 BIKQ13323 160 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 TCEA2Q15560 299 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 RPE65Q16518 533 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 ELFN2Q5R3F8 820 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 CDPF1Q6NVV7 123 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 GLDNQ6ZMI3 551 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 FJX1Q86VR8 437 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 LGI4Q8N135 537 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 PRSS35Q8N3Z0 413 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 NKAIN3Q8N8D7 197 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 FAM174AQ8TBP5 190 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 SLC25A28Q96A46 364 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 RGMAQ96B86 450 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 S100PBPQ96BU1 408 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 ELF4Q99607 663 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 C6orf106Q9H6K1 298 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 OPN4Q9UHM6 478 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 CYP8B1Q9UNU6 501 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 NUP214P35658 2090 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 SNRNP200O75643 2136 aaKnown RBP7.02□□□□□ -1.29
HDAC9-218ENST00000456174 PRUNE2Q8WUY3 3088 aa7.02□□□□□ -1.29
HDAC9-218ENST00000456174 TMEM129A0AVI4 362 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 SHISA3A0PJX4 238 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 TMEM72A0PK05 275 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 ARRDC5A6NEK1 342 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 H7BY64 318 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 SAP18O00422 153 aaKnown RBP7.01□□□□□ -1.29
HDAC9-218ENST00000456174 GSTZ1O43708 216 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-218ENST00000456174 PCDH7O60245 1069 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 NCR1O76036 304 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 B3GALT4O96024 378 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 EIF4EP06730 217 aaKnown RBP7.01□□□□□ -1.29
HDAC9-218ENST00000456174 COX7A2P14406 83 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 ZNF14P17017 642 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-218ENST00000456174 NFYBP25208 207 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 AK4P27144 223 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-218ENST00000456174 CERS1P27544 350 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 MMP15P51511 669 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 MECP2P51608 486 aaKnown RBP7.01□□□□□ -1.29
HDAC9-218ENST00000456174 CCR8P51685 355 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 CCR9P51686 369 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 CRISP1P54107 249 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 CASP9P55211 416 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 YPEL5P62699 121 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 PRR5P85299 388 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 SHC2P98077 582 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 MTAPQ13126 283 aa7.01□□□□□ -1.29
HDAC9-218ENST00000456174 GAB1Q13480 694 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms