RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 M0R3H8 397 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 OVOL3O00110 214 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 CDH2P19022 906 aaPredicted RBP18.61■□□□□ 0.57
HMGB3-205ENST00000455596 CBLP22681 906 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 CD40P25942 277 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 GRPRP30550 384 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 CDH12P55289 794 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 CLDN17P56750 224 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 PRPS1P60891 318 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 KLF10Q13118 480 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 MFSD13AQ14CX5 517 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 NRF1Q16656 503 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 VMACQ2NL98 169 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 PGGHGQ32M88 737 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 COQ5Q5HYK3 327 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 SWT1Q5T5J6 900 aaKnown RBP18.61■□□□□ 0.57
HMGB3-205ENST00000455596 NANOGP8Q6NSW7 305 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 SLC22A25Q6T423 547 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 KLHL24Q6TFL4 600 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 H1FNTQ75WM6 255 aaPredicted RBP18.61■□□□□ 0.57
HMGB3-205ENST00000455596 GPR32P1Q8NGA4 272 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 OR6S1Q8NH40 331 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 ZNF417Q8TAU3 575 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 SLC26A7Q8TE54 656 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 GTPBP3Q969Y2 492 aaKnown RBP18.61■□□□□ 0.57
HMGB3-205ENST00000455596 ALKBH3Q96Q83 286 aaPredicted RBP18.61■□□□□ 0.57
HMGB3-205ENST00000455596 ZNF587Q96SQ5 575 aaPredicted RBP18.61■□□□□ 0.57
HMGB3-205ENST00000455596 C1QTNF6Q9BXI9 259 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 LINC00470Q9BZP3 86 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 ALG2Q9H553 416 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 NANOGQ9H9S0 305 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 POU2F3Q9UKI9 436 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 ACANP16112 2415 aa18.61■□□□□ 0.57
HMGB3-205ENST00000455596 FMO6PO60774 539 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 WNT11O96014 354 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 NPPAP01160 153 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 GZMMP51124 257 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 SLC25A3Q00325 362 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 IL1RL1Q01638 556 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 GUCY1A3Q02108 690 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 LGALS3BPQ08380 585 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 C1DQ13901 141 aaKnown RBP18.6■□□□□ 0.57
HMGB3-205ENST00000455596 REP15Q6BDI9 236 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 ZNF613Q6PF04 617 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 DEPDC4Q8N2C3 294 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 LRRC58Q96CX6 371 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 BOD1Q96IK1 185 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 SMR3AQ99954 134 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 CCDC134Q9H6E4 229 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 SAR1AQ9NR31 198 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 B3GAT1Q9P2W7 334 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 RCE1Q9Y256 329 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 MAP1AP78559 2803 aaPredicted RBP18.6■□□□□ 0.57
HMGB3-205ENST00000455596 C2CD3Q4AC94 2353 aa18.6■□□□□ 0.57
HMGB3-205ENST00000455596 USF3Q68DE3 2245 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 H7C1Q1 480 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 MRASO14807 208 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 UPK3AO75631 287 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 NQO1P15559 274 aaKnown RBP18.59■□□□□ 0.57
HMGB3-205ENST00000455596 SPOCK1Q08629 439 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 ENTPD8Q5MY95 495 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 ADPRHL1Q8NDY3 354 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 OR8J3Q8NGG0 315 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 OR6T1Q8NGN1 323 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 OR1K1Q8NGR3 316 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 RASSF5Q8WWW0 418 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 ECSITQ9BQ95 431 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 TMEM43Q9BTV4 400 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 TRAF4Q9BUZ4 470 aaPredicted RBP18.59■□□□□ 0.57
HMGB3-205ENST00000455596 ASPNQ9BXN1 380 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 OBP2BQ9NPH6 170 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 MED4Q9NPJ6 270 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 CORINQ9Y5Q5 1042 aa18.59■□□□□ 0.57
HMGB3-205ENST00000455596 LOC102725191A0A1B0GVB3 256 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 TRIM64A6NGJ6 449 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 TRIM64BA6NI03 449 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 FAM171A2A8MVW0 826 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 CHP2O43745 196 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 AKAP8O43823 692 aaKnown RBP18.58■□□□□ 0.56
HMGB3-205ENST00000455596 SLC43A1O75387 559 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 ZNF432O94892 652 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 BGLAPP02818 100 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 CD247P20963 164 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 PTNP21246 168 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 CDKN1AP38936 164 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 HIKESHIQ53FT3 197 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 RABL3Q5HYI8 236 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 AGAP6Q5VW22 663 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 HMBOX1Q6NT76 420 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 CCDC80Q76M96 950 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 DTX2Q86UW9 622 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 CIARTQ8N365 385 aaPredicted RBP18.58■□□□□ 0.56
HMGB3-205ENST00000455596 VANGL1Q8TAA9 524 aaPredicted RBP18.58■□□□□ 0.56
HMGB3-205ENST00000455596 TAMM41Q96BW9 452 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 SLC41A3Q96GZ6 507 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 COX4I2Q96KJ9 171 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 GRIP2Q9C0E4 1043 aa18.58■□□□□ 0.56
HMGB3-205ENST00000455596 CPSF4LA6NMK7 179 aaKnown RBP18.57■□□□□ 0.56
HMGB3-205ENST00000455596 E7EQL1 145 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 MS4A18H0YCH9 400 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms