RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 AGFG2O95081 481 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 LDLRP01130 860 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 TSPAN19P0C672 248 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 CD8BP10966 210 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 FUT4P22083 530 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 KIR2DL2P43627 348 aaPredicted RBP12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 OMPP47874 163 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 ARHGDIAP52565 204 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 PUDPQ08623 228 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 SEC23BQ15437 767 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 TAF11Q15544 211 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 MICAQ29983 383 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 C1orf94Q6P1W5 598 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 TBPL2Q6SJ96 375 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 NANOGNBQ7Z5D8 188 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 GALNT5Q7Z7M9 940 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 CCDC103Q8IW40 242 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 NAXEQ8NCW5 288 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 LILRB4Q8NHJ6 448 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 TMEM45BQ96B21 275 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 BDH2Q9BUT1 245 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 ING1Q9UK53 422 aaPredicted RBP12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 HIF3AQ9Y2N7 669 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 NOX1Q9Y5S8 564 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 OR6C65A6NJZ3 312 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 ZNF814B7Z6K7 855 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 KLF4O43474 513 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 AKAP8O43823 692 aaKnown RBP12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 E2F6O75461 281 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 SAGP10523 405 aaPredicted RBP12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 MAKP20794 623 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 FPR3P25089 353 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 AGTR1P30556 359 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 PCYT1AP49585 367 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 PRPS1P60891 318 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 RPS4XP62701 263 aaKnown RBP12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 FOXD4Q12950 439 aaPredicted RBP12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 ZNF770Q6IQ21 691 aaPredicted RBP12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 PLXDC2Q6UX71 529 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 ZER1Q7Z7L7 766 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 OAFQ86UD1 273 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 GCNT2Q8N0V5 402 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 GNPDA2Q8TDQ7 276 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 SDCCAG3Q96C92 435 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 PLSCR4Q9NRQ2 329 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
HMGXB4-204ENST00000455359 NPIPB13A6NJU9 1138 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 NPIPB4C9JG80 1138 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 LRRN3E7EW58 273 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 MS4A18H0YCH9 400 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 PYCARD-AS1I3L0S3 204 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 MSTNO14793 375 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 PIP5K1CO60331 668 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 RAMP1O60894 148 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 ENTPD5O75356 428 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 TIPRLO75663 272 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 CNOT4O95628 575 aaKnown RBP12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 ADORA3P0DMS8 318 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 ZNF43P17038 809 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 KLK2P20151 261 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 PTNP21246 168 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 ERFP50548 548 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 LSM11P83369 360 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 FOXF2Q12947 444 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 C1DQ13901 141 aaKnown RBP12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 MS4A18Q3C1V0 323 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 PGBD2Q6P3X8 592 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 SHQ1Q6PI26 577 aaKnown RBP12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 GPAT4Q86UL3 456 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 CCDC71Q8IV32 467 aaPredicted RBP12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 UEVLDQ8IX04 471 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 TUSC5Q8IXB3 177 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 LRRC17Q8N6Y2 441 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 CNEP1R1Q8N9A8 125 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 CA5BP1Q8WTZ4 195 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 ITLN2Q8WWU7 325 aaPredicted RBP12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 STMN2Q93045 179 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 STARD4Q96DR4 205 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 CENPNQ96H22 339 aaPredicted RBP12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 OSBPL10Q9BXB5 764 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 DGCR6LQ9BY27 220 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 MGAT4BQ9UQ53 548 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 RCE1Q9Y256 329 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
HMGXB4-204ENST00000455359 RELNP78509 3460 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 RRP9O43818 475 aaKnown RBP12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 ZG16O60844 167 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 CGAP01215 116 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 GSTM3P21266 225 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 CBLP22681 906 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 UQCRC1P31930 480 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 GSSP48637 474 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 COX10Q12887 443 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms