RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 NSL1Q96IY1 281 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 HDHD5Q9BXW7 423 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 MEPEQ9NQ76 525 aaPredicted RBP12.51□□□□□ -0.41
HDAC4-205ENST00000454542 MAN2C1Q9NTJ4 1040 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 DCAF13Q9NV06 445 aaKnown RBP12.51□□□□□ -0.41
HDAC4-205ENST00000454542 PARPBPQ9NWS1 579 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 RPS6KA6Q9UK32 745 aa12.51□□□□□ -0.41
HDAC4-205ENST00000454542 RAI1Q7Z5J4 1906 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-205ENST00000454542 TEX15Q9BXT5 2789 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 A0A1W2PPR1 153 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ARPC2O15144 300 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF432O94892 652 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF682O95780 498 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 HPRP00739 348 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ITGA5P08648 1049 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ASAH2BP0C7U1 165 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 TSPO2Q5TGU0 170 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 TMEM225Q6GV28 225 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 TTC33Q6PID6 262 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-205ENST00000454542 H1FNTQ75WM6 255 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-205ENST00000454542 GPAT4Q86UL3 456 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ARHGAP24Q8N264 748 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF433Q8N7K0 673 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-205ENST00000454542 RNF217Q8TC41 542 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 LIPHQ8WWY8 451 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-205ENST00000454542 S100PBPQ96BU1 408 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 OXGR1Q96P68 337 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
HDAC4-205ENST00000454542 SLCO5A1Q9H2Y9 848 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF226Q9NYT6 803 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 TAS2R16Q9NYV7 291 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF229Q9UJW7 825 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 SAMD4AQ9UPU9 718 aaKnown RBP12.5□□□□□ -0.41
HDAC4-205ENST00000454542 SNX13Q9Y5W8 968 aa12.5□□□□□ -0.41
HDAC4-205ENST00000454542 TACC2O95359 2948 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 ENO4A6NNW6 628 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 J3KTA2 159 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 FFAR1O14842 300 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 MT-ND1P03886 318 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 TSPAN19P0C672 248 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 FUT4P22083 530 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 IL32P24001 234 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 SELENOPP49908 381 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 PUDPQ08623 228 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 ST3GAL3Q11203 375 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 TSC22D1Q15714 1073 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 MS4A18Q3C1V0 323 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 IQCCQ4KMZ1 466 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 BHLHA15Q7RTS1 189 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-205ENST00000454542 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 TRPM8Q7Z2W7 1104 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 TMEM200AQ86VY9 491 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 FAM86B1Q8N7N1 296 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 POMGNT2Q8NAT1 580 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 C1orf162Q8NEQ5 155 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-205ENST00000454542 OR5J2Q8NH18 312 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 PFN4Q8NHR9 129 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 TMEM255BQ8WV15 326 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 TMEM239Q8WW34 195 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 ASPNQ9BXN1 380 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 LINC00470Q9BZP3 86 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 C1orf21Q9H246 121 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 CLEC4MQ9H2X3 399 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-205ENST00000454542 SLC7A10Q9NS82 523 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 ASB6Q9NWX5 421 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 ENPP4Q9Y6X5 453 aa12.49□□□□□ -0.41
HDAC4-205ENST00000454542 OR6C65A6NJZ3 312 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 B2RBV5 119 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 KPNA4O00629 521 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-205ENST00000454542 PLPP3O14495 311 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 LYZL6O75951 148 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 ZNF43P17038 809 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 CBLP22681 906 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 FOXG1P55316 489 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-205ENST00000454542 ZP4Q12836 540 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 TAB1Q15750 504 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 ANKRD34AQ69YU3 496 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 RINLQ6ZS11 566 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 SSX8Q7RTT4 187 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 CDC20BQ86Y33 519 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 TMEM123Q8N131 208 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 KDM8Q8N371 416 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 PIK3C3Q8NEB9 887 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 C7orf34Q96L11 122 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 DHRS1Q96LJ7 313 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 HS6ST2Q96MM7 605 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 ANKRD19PQ9H560 264 aa12.48□□□□□ -0.41
HDAC4-205ENST00000454542 C6orf203Q9P0P8 240 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-205ENST00000454542 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
HDAC4-205ENST00000454542 HTR3EA5X5Y0 456 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 KLF4O43474 513 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 AKAP8O43823 692 aaKnown RBP12.47□□□□□ -0.41
HDAC4-205ENST00000454542 OR7A10O76100 309 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms