RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 C8orf44Q96CB5 159 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 STMN3Q9NZ72 180 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 KLRF1Q9NZS2 232 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 CTSFQ9UBX1 484 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ALG5Q9Y673 324 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 RNF215Q9Y6U7 377 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 TTC28Q96AY4 2481 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 DUX1O43812 170 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ACAA2P42765 397 aaKnown RBP10.95□□□□□ -0.66
SMPD4-213ENST00000454468 BLVRAP53004 296 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 MGAT2Q10469 447 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 DMRTC1Q5HYR2 192 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 LRFN4Q6PJG9 635 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 FCRLAQ7L513 359 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 PM20D2Q8IYS1 436 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 TXNDC15Q96J42 360 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 VSTM2LQ96N03 204 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 PCDHGB7Q9Y5F8 929 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 LOC100509620A0A075B734 347 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 SLC16A7O60669 478 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 FMO6PO60774 539 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 NSA2O95478 260 aaKnown RBP10.95□□□□□ -0.66
SMPD4-213ENST00000454468 DHFRP00374 187 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 SPI1P17947 270 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ATF4P18848 351 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-213ENST00000454468 BCKDHBP21953 392 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 PITPNBP48739 271 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 EVX1P49640 407 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 FAAP20Q6NZ36 180 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ZCCHC12Q6PEW1 402 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 METAP1DQ6UB28 335 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-213ENST00000454468 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 POMGNT2Q8NAT1 580 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 OR5M1Q8NGP8 315 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 OR8S1Q8NH09 359 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 LGALS14Q8TCE9 139 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 SLC2A12Q8TD20 617 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 PCNPQ8WW12 178 aaKnown RBP10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ZNRF4Q8WWF5 429 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 KLHDC3Q9BQ90 382 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 GTPBP2Q9BX10 602 aaKnown RBP10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ADGRL4Q9HBW9 690 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF337Q9Y3M9 751 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 PCDHGB2Q9Y5G2 931 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 CEP250Q9BV73 2442 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 PI4KAP42356 2102 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 A0A087WV48 116 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 TLCD2A6NGC4 264 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 PPM1BO75688 479 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 TFP02787 698 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 ETV6P41212 452 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 ACTC1P68032 377 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 ACTA1P68133 377 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 STK11Q15831 433 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 FHL5Q5TD97 284 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 CARD17Q5XLA6 110 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 TMPRSS11FQ6ZWK6 438 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 UBQLNLQ8IYU4 475 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 CACNG6Q9BXT2 260 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 ERVMER34-1Q9H9K5 563 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 NCDNQ9UBB6 729 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 COPS3Q9UNS2 423 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 LANCL1O43813 399 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 NOS1APO75052 506 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-213ENST00000454468 CCKBRP32239 447 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 SERTAD2Q14140 314 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 MEP1BQ16820 701 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 SIGIRRQ6IA17 410 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 WBP2NLQ6ICG8 309 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 OR7E24Q6IFN5 339 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 PLXDC1Q8IUK5 500 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 ASB12Q8WXK4 309 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 DAZLQ92904 295 aaKnown RBP10.94□□□□□ -0.66
SMPD4-213ENST00000454468 C3orf49Q96BT1 292 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 PELI1Q96FA3 418 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 NXF2Q9GZY0 626 aaKnown RBP10.94□□□□□ -0.66
SMPD4-213ENST00000454468 UBE2ZQ9H832 354 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-213ENST00000454468 GMEB2Q9UKD1 530 aa10.94□□□□□ -0.66
SMPD4-213ENST00000454468 SF3B6Q9Y3B4 125 aaKnown RBP10.94□□□□□ -0.66
SMPD4-213ENST00000454468 FAM172BPA6NC97 362 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 BCAT2O15382 392 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 B3GALNT1O75752 331 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 HEXBP07686 556 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 CDKN2AP42771 156 aaKnown RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 TAS2R43P59537 309 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 DGCR2P98153 550 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF85Q03923 595 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 CDC20Q12834 499 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 C14orf28Q4W4Y0 310 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 SLC6A19Q695T7 634 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 APOOLQ6UXV4 268 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 NUDT9Q9BW91 350 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF223Q9UK11 482 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 COL4A3Q01955 1670 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 TICRRQ7Z2Z1 1910 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 G3V3Y1 287 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 PLA2G10O15496 165 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 SERPINA3P01011 423 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms