RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CXCR1P25024 350 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GIFP27352 417 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IL12AP29459 219 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 THBS2P35442 1172 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ACAA2P42765 397 aaKnown RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SEC24CP53992 1094 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AQP5P55064 265 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ERVS71-1P61550 626 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NAA20P61599 178 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 UFM1P61960 85 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EMX2Q04743 252 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PIGFQ07326 219 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DAG1Q14118 895 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CASP8Q14790 479 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ELFN2Q5R3F8 820 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C1orf140Q5VVS0 124 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C1orf229Q6ZS94 237 aaPredicted RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CREB3L2Q70SY1 520 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SSX8Q7RTT4 187 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GLCCI1Q86VQ1 547 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CLIP4Q8N3C7 705 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OR8J2Q8NGG1 315 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF417Q8TAU3 575 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 UBASH3BQ8TF42 649 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MAL2Q969L2 176 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KTI12Q96EK9 354 aaPredicted RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DUX5Q96PT3 197 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LRRC37BQ96QE4 947 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TSPAN32Q96QS1 320 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF587Q96SQ5 575 aaPredicted RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SORT1Q99523 831 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DOK1Q99704 481 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EMC6Q9BV81 110 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SAP130Q9H0E3 1048 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RAB1BQ9H0U4 201 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ESM1Q9NQ30 184 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM45AQ9NWC5 275 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CRNNQ9UBG3 495 aaPredicted RBP5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TRAPPC4Q9Y296 219 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CHST2Q9Y4C5 530 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CACNG2Q9Y698 323 aa5.16□□□□□ -1.58
HLA-DPA3-207ENST00000454398 VWFP04275 2813 aa5.15□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IGKV1D-42A0A075B6H8 117 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PRSS51A0A1B0GVH4 220 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A1W2PPW3 197 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CDHR4A6H8M9 788 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CCDC154A6NI56 674 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FTCDNL1E5RQL4 147 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LRRN3E7EW58 273 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 M0R233 179 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PPIHO43447 177 aaKnown RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TRAF3IP2O43734 574 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF500O60304 480 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PDE5AO76074 875 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AHSA1O95433 338 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MSMBP08118 114 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NUDT7P0C024 238 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FAM157BP0CG42 384 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CD79AP11912 226 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CCL2P13500 99 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HLA-DOBP13765 273 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 IL7RP16871 459 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 EPHA1P21709 976 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BGNP21810 368 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HTR2AP28223 471 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 S100A3P33764 101 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MAGEB1P43366 347 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GPR6P46095 362 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HTR3AP46098 478 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GIPRP48546 466 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PTDSS1P48651 473 aaKnown RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 EGR4Q05215 589 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LIN52Q52LA3 116 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM225Q6GV28 225 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FAHD2BQ6P2I3 314 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LRRC34Q8IZ02 419 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM123Q8N131 208 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF786Q8N393 782 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PAQR4Q8N4S7 273 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C3orf56Q8N813 242 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NUP37Q8NFH4 326 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR9I1Q8NGQ6 314 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR52P1PQ8NH57 321 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GCDHQ92947 438 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM186Q96B77 213 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TESCQ96BS2 214 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FAHD2AQ96GK7 314 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM19Q96HH6 336 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CCDC115Q96NT0 180 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TRNT1Q96Q11 434 aaKnown RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR2M2Q96R28 347 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PANX1Q96RD7 426 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TAPBPLQ9BX59 468 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF442Q9H7R0 627 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GPR35Q9HC97 309 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MYOZ1Q9NP98 299 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 POLE3Q9NRF9 147 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF275Q9NSD4 429 aaPredicted RBP5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PARPBPQ9NWS1 579 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms