RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TRMT5Q32P41 509 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 MMEL1Q495T6 779 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 HSP90B2PQ58FF3 399 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 SWT1Q5T5J6 900 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 AGAP6Q5VW22 663 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 HMBOX1Q6NT76 420 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 H1FNTQ75WM6 255 aaPredicted RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 PATL1Q86TB9 770 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 EPHX4Q8IUS5 362 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 KDM8Q8N371 416 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 OR6S1Q8NH40 331 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 OR10A6Q8NH74 314 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 ZNF417Q8TAU3 575 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 TAAR8Q969N4 342 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 ZNF587Q96SQ5 575 aaPredicted RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 MCHR1Q99705 422 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 SMR3AQ99954 134 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 SH3GL1Q99961 368 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 TRAF4Q9BUZ4 470 aaPredicted RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 PRR14Q9BWN1 585 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 RSPO3Q9BXY4 272 aaPredicted RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 KAT8Q9H7Z6 458 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 FKRPQ9H9S5 495 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 OBP2BQ9NPH6 170 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 FGFR1OP2Q9NVK5 253 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 KLHL14Q9P2G3 628 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 RCE1Q9Y256 329 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 CORINQ9Y5Q5 1042 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 IGKV1D-42A0A075B6H8 117 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 A0A0B4J2E0 115 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 A0A1B0GX12 115 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 M0R3H8 397 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 FMO6PO60774 539 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 FZD7O75084 574 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 LGI1O95970 557 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 OPN1SWP03999 348 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 CBLP22681 906 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 PAX7P23759 505 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 GRPRP30550 384 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 PCGF2P35227 344 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 CDKN1AP38936 164 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 CDH12P55289 794 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 SH3BGRP55822 239 aaPredicted RBP9.36□□□□□ -0.91
DDX39A-203ENST00000454233 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
DDX39A-203ENST00000454233 LTBQ06643 244 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 CLEC12BQ2HXU8 276 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 DTX2Q86UW9 622 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 FBXL14Q8N1E6 418 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 CIARTQ8N365 385 aaPredicted RBP9.36□□□□□ -0.91
DDX39A-203ENST00000454233 GPR137CQ8N3F9 429 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 C10orf53Q8N6V4 93 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 ADPRHL1Q8NDY3 354 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 OR1K1Q8NGR3 316 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 RASSF5Q8WWW0 418 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 BOD1Q96IK1 185 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 HS6ST2Q96MM7 605 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 ZNF317Q96PQ6 595 aaPredicted RBP9.36□□□□□ -0.91
DDX39A-203ENST00000454233 ALKBH3Q96Q83 286 aaPredicted RBP9.36□□□□□ -0.91
DDX39A-203ENST00000454233 ARHGDIGQ99819 225 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 DHRS9Q9BPW9 319 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 KCNS3Q9BQ31 491 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 TMEM43Q9BTV4 400 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 ASPNQ9BXN1 380 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 LINC00470Q9BZP3 86 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 GRIP2Q9C0E4 1043 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 BARX1Q9HBU1 254 aaPredicted RBP9.36□□□□□ -0.91
DDX39A-203ENST00000454233 ATP23Q9Y6H3 246 aa9.36□□□□□ -0.91
DDX39A-203ENST00000454233 LOC102725191A0A1B0GVB3 256 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 BBIP1A8MTZ0 92 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 E7EQL1 145 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 FBP2O00757 339 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 MRASO14807 208 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 TPST2O60704 377 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 UPK3AO75631 287 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 NPPAP01160 153 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 CD8AP01732 235 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 HEXAP06865 529 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 TTKP33981 857 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 FABP6P51161 128 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 SLC25A3Q00325 362 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 ROR2Q01974 943 aaKnown RBP9.35□□□□□ -0.91
DDX39A-203ENST00000454233 LGALS3BPQ08380 585 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 SPOCK1Q08629 439 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 SF3A3Q12874 501 aaKnown RBP eCLIP9.35□□□□□ -0.914e-6■■■■■ 26.8
DDX39A-203ENST00000454233 KLF10Q13118 480 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 PMS2P3Q13401 168 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 VEZF1Q14119 521 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 NRF1Q16656 503 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 DUSP7Q16829 419 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 VMACQ2NL98 169 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 TBRG1Q3YBR2 411 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 HIKESHIQ53FT3 197 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 COQ5Q5HYK3 327 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 NANOGP8Q6NSW7 305 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 ZNF544Q6NX49 715 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 ANKRD16Q6P6B7 361 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 ZNF613Q6PF04 617 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 Q71RC1 249 aaPredicted RBP9.35□□□□□ -0.91
DDX39A-203ENST00000454233 UEVLDQ8IX04 471 aa9.35□□□□□ -0.91
DDX39A-203ENST00000454233 SCAIQ8N9R8 606 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms