RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ZNF100Q8IYN0 542 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 KDM8Q8N371 416 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 LRRC17Q8N6Y2 441 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 ZNF610Q8N9Z0 462 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 RELL2Q8NC24 303 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 OR9K2Q8NGE7 335 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 SLC7A13Q8TCU3 470 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 LIPHQ8WWY8 451 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 ALPK1Q96QP1 1244 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 FANCFQ9NPI8 374 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 C20orf141Q9NUB4 165 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 JKAMPQ9P055 326 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 SEC14L4Q9UDX3 406 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 ING1Q9UK53 422 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 KLF2Q9Y5W3 355 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 FLVCR1Q9Y5Y0 555 aa12.99□□□□□ -0.33
NCKIPSD-207ENST00000453349 MED12Q93074 2177 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 LOC102725191A0A1B0GVB3 256 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 A8MXE2 369 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 PRSS44E7EML9 344 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 BLOC1S5-TXNDC5H3BN57 136 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 TNFRSF11BO00300 401 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 ASAH2BP0C7U1 165 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 SAGP10523 405 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 IFNGR2P38484 337 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 ERFP50548 548 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 HMGA2P52926 109 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 ZP4Q12836 540 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 POU4F3Q15319 338 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 ZSCAN26Q16670 478 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 OR2T5Q6IEZ7 315 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 BEND4Q6ZU67 534 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 CREB3L2Q70SY1 520 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 SLC46A3Q7Z3Q1 461 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 UEVLDQ8IX04 471 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 LINC00471Q8N535 108 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 OR2T29Q8NH02 315 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 UTP4Q969X6 686 aaKnown RBP12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 RBM24Q9BX46 236 aaKnown RBP12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 OPN3Q9H1Y3 402 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 REEP1Q9H902 201 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 CCM2LQ9NUG4 571 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 FOXD3Q9UJU5 478 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 TMEM5Q9Y2B1 443 aa12.98□□□□□ -0.33
NCKIPSD-207ENST00000453349 TRBV4-1A0A0J9YWV2 114 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 A1L4Q6 167 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 SH3PXD2BA1X283 911 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 EFCAB9A8MZ26 197 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 C11orf98E9PRG8 122 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 RNF13O43567 381 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 FKBP6O75344 327 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 CLDN1O95832 211 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 PUDPQ08623 228 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 TAF11Q15544 211 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 TMPRSS11FQ6ZWK6 438 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 AAED1Q7RTV5 226 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 PXKQ7Z7A4 578 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 OAFQ86UD1 273 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 C10orf67Q8IYJ2 551 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 PAPD5Q8NDF8 572 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 OR4K5Q8NGD3 323 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 TMEM45BQ96B21 275 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 PSMG3-AS1Q96PY0 264 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 ELOVL5Q9NYP7 299 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 TAS2R5Q9NYW4 299 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 NOX1Q9Y5S8 564 aa12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 NCOA6Q14686 2063 aaPredicted RBP12.97□□□□□ -0.33
NCKIPSD-207ENST00000453349 AKAP8O43823 692 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 OR10H3O60404 316 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 MAKP20794 623 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 UQCRC1P31930 480 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 OR3A2P47893 321 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 SLC9A3P48764 834 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 CLDN17P56750 224 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 GK3PQ14409 553 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 SEC23BQ15437 767 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 EXOC3L2Q2M3D2 409 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 FBXL19-AS1Q494R0 122 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 ANKDD1AQ495B1 522 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 CASP12Q6UXS9 341 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 KIF18BQ86Y91 864 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 UBE2J2Q8N2K1 259 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 ZIC4Q8N9L1 334 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 APH1AQ96BI3 265 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 ZNF385AQ96PM9 386 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 FUZQ9BT04 418 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 UPB1Q9UBR1 384 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 SAMHD1Q9Y3Z3 626 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 AP4S1Q9Y587 144 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 LYVE1Q9Y5Y7 322 aa12.96□□□□□ -0.33
NCKIPSD-207ENST00000453349 MYO7BQ6PIF6 2116 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 CCNB2O95067 398 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 POU2F1P14859 743 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 GPR4P46093 362 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 OMPP47874 163 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms