RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 HERVK_113P63132 956 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 ERVK-8P63133 956 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CCL7P80098 99 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CBX1P83916 185 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CDKL1Q00532 357 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 RIGQ13278 110 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 LY6DQ14210 128 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 SELPLGQ14242 412 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CYTH1Q15438 398 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 C14orf28Q4W4Y0 310 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 FFAR4Q5NUL3 377 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 TPRG1LQ5T0D9 272 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 DDI2Q5TDH0 399 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 SPECC1LQ69YQ0 1117 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CHMP1BQ7LBR1 199 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 MCOLN2Q8IZK6 566 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CENPSQ8N2Z9 138 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 ATPAF2Q8N5M1 289 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CHDHQ8NE62 594 aaPredicted RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CCDC112Q8NEF3 446 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 NFAM1Q8NET5 270 aaPredicted RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 OR9Q2Q8NGE9 314 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 OR5AP2Q8NGF4 316 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 OR56A4Q8NGH8 313 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 OR8J1Q8NGP2 316 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 OR13C2Q8NGS9 318 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CTNNBL1Q8WYA6 563 aaPredicted RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 PNPLA2Q96AD5 504 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 SLC25A36Q96CQ1 311 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 NUS1Q96E22 293 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 MED8Q96G25 268 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 PDXPQ96GD0 296 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CELF6Q96J87 481 aaKnown RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 ERVK-6Q9BXR3 956 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 RHOJQ9H4E5 214 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 LRRC19Q9H756 370 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 KCNK13Q9HB14 408 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 MRPL47Q9HD33 250 aaKnown RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 MRPL40Q9NQ50 206 aaKnown RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 STARD5Q9NSY2 213 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 GPATCH2LQ9NWQ4 482 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 TEX10Q9NXF1 929 aaPredicted RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 GPR83Q9NYM4 423 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 PISDQ9UG56 409 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 PCSK1NQ9UHG2 260 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 ERRFI1Q9UJM3 462 aaPredicted RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 NEU3Q9UQ49 428 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 TCF19Q9Y242 345 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 APC2O95996 2303 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 UNC13CQ8NB66 2214 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 IGSF10Q6WRI0 2623 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 IGHV4-4A0A075B6R2 117 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 NPIPB9F8W1W9 429 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 P2RY10O00398 339 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 NTN3O00634 580 aaPredicted RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 NVLO15381 856 aaKnown RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 FGF17O60258 216 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 TSPAN2O60636 221 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 TSC22D2O75157 780 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 BCAS1O75363 584 aaPredicted RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 AP2A2O94973 939 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 FHP07954 510 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 GSTA1P08263 222 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 HOXC4P09017 264 aaPredicted RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 CD82P27701 267 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 MIPP30301 263 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 GPR183P32249 361 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 UGT1A5P35504 534 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 GPR1P46091 355 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 PAX9P55771 341 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 TPM4P67936 248 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 PHEXP78562 749 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OGDHQ02218 1023 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 DDX39BQ13838 428 aaKnown RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 LINC01620Q4KN68 170 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OTUD3Q5T2D3 398 aaPredicted RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 SLC35E4Q6ICL7 350 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 PYHIN1Q6K0P9 492 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 PNCKQ6P2M8 343 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 LUZP1Q86V48 1076 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 PSTKQ8IV42 348 aaKnown RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OR4F17Q8NGA8 305 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OR56B2PQ8NGI1 322 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OR4F5Q8NH21 305 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OR6S1Q8NH40 331 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OR1E3Q8WZA6 343 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 RPL3LQ92901 407 aaKnown RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF524Q96C55 264 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF599Q96NL3 588 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OR4F4Q96R69 305 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OVOL2Q9BRP0 275 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 FUCA2Q9BTY2 467 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 SNRNP25Q9BV90 132 aaKnown RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 CLMPQ9H6B4 373 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 VPS37BQ9H9H4 285 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 PDFQ9HBH1 243 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 FGF22Q9HCT0 170 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 NRN1Q9NPD7 142 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 AIPL1Q9NZN9 384 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 BAIAP2L1Q9UHR4 511 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms