RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NELFAQ9H3P2 528 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 GPR45Q9Y5Y3 372 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 TMEM247A6NEH6 219 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 TRPC5OSA6NMA1 111 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 VSTM5A8MXK1 200 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 FTCDNL1E5RQL4 147 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 SDHDO14521 159 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 HDAC3O15379 428 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 TGFAP01135 160 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 GSNP06396 782 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 C8BP07358 591 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 PNMTP11086 282 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 IDO1P14902 403 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 BGNP21810 368 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 CRATP43155 626 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 DSTNP60981 165 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 ROR2Q01974 943 aaKnown RBP9.45□□□□□ -0.9
USP1-204ENST00000452143 POU3F1Q03052 451 aaPredicted RBP9.45□□□□□ -0.9
USP1-204ENST00000452143 BST1Q10588 318 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 BNIP2Q12982 314 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 CARTPTQ16568 116 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 C5orf46Q6UWT4 87 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 MSANTD1Q6ZTZ1 278 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 IL17RELQ6ZVW7 336 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 LINGO2Q7L985 606 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 SLC38A5Q8WUX1 472 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 NEU4Q8WWR8 484 aaPredicted RBP9.45□□□□□ -0.9
USP1-204ENST00000452143 HPS1Q92902 700 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 ANKRD27Q96NW4 1050 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 SPATA9Q9BWV2 254 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 PNPOQ9NVS9 261 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 ZNF232Q9UNY5 417 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 IFT52Q9Y366 437 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 PCDHB14Q9Y5E9 798 aa9.45□□□□□ -0.9
USP1-204ENST00000452143 A0A096LPE4 126 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 A0A0G2JPF8 293 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 A0A1W2PPZ6 126 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 HNRNPCL2B2RXH8 293 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 HNRNPCL3B7ZW38 293 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 hCG_2039718K7EN88 272 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 NR5A2O00482 541 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 AKAP8O43823 692 aaKnown RBP9.44□□□□□ -0.9
USP1-204ENST00000452143 OR2T1O43869 369 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 HNRNPCL1O60812 293 aaKnown RBP9.44□□□□□ -0.9
USP1-204ENST00000452143 SLC43A1O75387 559 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 UPK3AO75631 287 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 SLC22A3O75751 556 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 ZNF432O94892 652 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 ANP32DO95626 131 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 TACSTD2P09758 323 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 HNRNPCL4P0DMR1 293 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 PRG2P13727 222 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 ETFAP13804 333 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 CBR1P16152 277 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 ZNF43P17038 809 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 NPR2P20594 1047 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 EPHA3P29320 983 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 CALCRP30988 508 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 ARR3P36575 388 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 CHN2P52757 468 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 TUBA1BP68363 451 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 TUBA4AP68366 448 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 LGALS3BPQ08380 585 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 PDCD4Q53EL6 469 aaKnown RBP9.44□□□□□ -0.9
USP1-204ENST00000452143 LIPNQ5VXI9 398 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 VHLLQ6RSH7 139 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 UGT2A3Q6UWM9 527 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 C6orf89Q6UWU4 347 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 TUBA1AQ71U36 451 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 SERPINA11Q86U17 422 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 LSRQ86X29 649 aaPredicted RBP9.44□□□□□ -0.9
USP1-204ENST00000452143 CCDC36Q8IYA8 594 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 RFLNBQ8N5W9 214 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 IL17RDQ8NFM7 739 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 TMEM19Q96HH6 336 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 PTDSS2Q9BVG9 487 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 RMND5AQ9H871 391 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 TPT1P8Q9HAU6 139 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 C12orf10Q9HB07 376 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 SLC6A13Q9NSD5 602 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 CHST2Q9Y4C5 530 aa9.44□□□□□ -0.9
USP1-204ENST00000452143 SLCO1B7G3V0H7 640 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 AIM2O14862 343 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 STAMBPO95630 424 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 DAOP14920 347 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 RPS5P46782 204 aaKnown RBP9.43□□□□□ -0.9
USP1-204ENST00000452143 CLDN17P56750 224 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 EGR4Q05215 589 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 FADDQ13158 208 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 TNFAIP8L3Q5GJ75 292 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 RPS26P11Q5JNZ5 115 aaPredicted RBP9.43□□□□□ -0.9
USP1-204ENST00000452143 FAM69AQ5T7M9 428 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 ZNF786Q8N393 782 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 CLIP4Q8N3C7 705 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 GPR137CQ8N3F9 429 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 ADPRHL1Q8NDY3 354 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 PIK3C3Q8NEB9 887 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 ITCHQ96J02 903 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms