RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	WFDC6	Q9BQY6	131 aa		13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	ASPN	Q9BXN1	380 aa		13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	ARMCX1	Q9P291	453 aa		13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	SEC14L4	Q9UDX3	406 aa		13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	LAMP3	Q9UQV4	416 aa		13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	AMDHD2	Q9Y303	409 aa		13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	SLC25A15	Q9Y619	301 aa		13.89	□□□□□ -0.19
HDLBP-223	ENST00000449864	ACAN	P16112	2415 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864		M0R1B8	84 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	SLC22A2	O15244	555 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	CHP2	O43745	196 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	AKAP8	O43823	692 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	TPST2	O60704	377 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	CDH11	P55287	796 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	CLDN17	P56750	224 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	LGALS3BP	Q08380	585 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	ENTPD8	Q5MY95	495 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	ERICH5	Q6P6B1	374 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	ZNF613	Q6PF04	617 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	H1FNT	Q75WM6	255 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	YTHDF3	Q7Z739	585 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	KRTAP1-3	Q8IUG1	177 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	EPHX4	Q8IUS5	362 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	OR6T1	Q8NGN1	323 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	PROX1	Q92786	737 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	NEUROG1	Q92886	237 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	OXGR1	Q96P68	337 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	GSX2	Q9BZM3	304 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	AMBRA1	Q9C0C7	1298 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	SLC17A5	Q9NRA2	495 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	POU2F3	Q9UKI9	436 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	RCE1	Q9Y256	329 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	B3GALT5	Q9Y2C3	310 aa		13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-223	ENST00000449864	PLCE1	Q9P212	2302 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	ATP8B1	O43520	1251 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	TMCC2	O75069	709 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	SLC43A1	O75387	559 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	CD247	P20963	164 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	PTAFR	P25105	342 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	GZMM	P51124	257 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	NPTX1	Q15818	432 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	HMBOX1	Q6NT76	420 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	SLC22A25	Q6T423	547 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	CCDC80	Q76M96	950 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	CALHM3	Q86XJ0	350 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	POU5F2	Q8N7G0	328 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	ADPRHL1	Q8NDY3	354 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	SMAP2	Q8WU79	429 aa	Predicted RBP	13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	RCN3	Q96D15	328 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	RADIL	Q96JH8	1075 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	TMEM43	Q9BTV4	400 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	C1QTNF6	Q9BXI9	259 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	FAIM	Q9NVQ4	179 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	MGAT4B	Q9UQ53	548 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	CORIN	Q9Y5Q5	1042 aa		13.87	□□□□□ -0.19
HDLBP-223	ENST00000449864	TRAPPC13	A5PLN9	417 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	CCDC22	O60826	627 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	FZD7	O75084	574 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	WNT11	O96014	354 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	IFNA14	P01570	189 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	FOSL1	P15407	271 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	RIPPLY3	P57055	190 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	PRPS1	P60891	318 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	PMS2P3	Q13401	168 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	VEZF1	Q14119	521 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	LRRC23	Q53EV4	343 aa	Predicted RBP	13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	HIKESHI	Q53FT3	197 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	TTC33	Q6PID6	262 aa	Predicted RBP	13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	RBM45	Q8IUH3	476 aa	Known RBP	13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	UEVLD	Q8IX04	471 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	DEPDC4	Q8N2C3	294 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	GPR137C	Q8N3F9	429 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	SCAI	Q8N9R8	606 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	WDR31	Q8NA23	367 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	OR6S1	Q8NH40	331 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	ADAMTS16	Q8TE57	1224 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	IGFBPL1	Q8WX77	278 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	GTPBP3	Q969Y2	492 aa	Known RBP	13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864		Q96MF0	132 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	MOGAT1	Q96PD6	335 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	ALG2	Q9H553	416 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	CISD1	Q9NZ45	108 aa	Known RBP	13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	B3GAT1	Q9P2W7	334 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	BAG5	Q9UL15	447 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	SLC7A7	Q9UM01	511 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	SH3GLB1	Q9Y371	365 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	USF3	Q68DE3	2245 aa		13.86	□□□□□ -0.19
HDLBP-223	ENST00000449864	C2CD3	Q4AC94	2353 aa		13.85	□□□□□ -0.19
HDLBP-223	ENST00000449864	FAM220BP	B1ANY3	271 aa		13.85	□□□□□ -0.19
HDLBP-223	ENST00000449864	SHISA9	B4DS77	424 aa		13.85	□□□□□ -0.19
HDLBP-223	ENST00000449864	UPK3A	O75631	287 aa		13.85	□□□□□ -0.19
HDLBP-223	ENST00000449864	BGLAP	P02818	100 aa		13.85	□□□□□ -0.19
HDLBP-223	ENST00000449864	CD40	P25942	277 aa		13.85	□□□□□ -0.19
HDLBP-223	ENST00000449864	CRYBA2	P53672	197 aa		13.85	□□□□□ -0.19
HDLBP-223	ENST00000449864	SH3BGR	P55822	239 aa	Predicted RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms