RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 OR5M8Q8NGP6 311 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 AKR7LQ8NHP1 331 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 SNX33Q8WV41 574 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 SLC39A7Q92504 469 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 DVL3Q92997 716 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 OTUB2Q96DC9 234 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 UPB1Q9UBR1 384 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 GNG8Q9UK08 70 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 FBXL4Q9UKA2 621 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 GOLGA4Q13439 2230 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 PLPP1O14494 284 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 CXCL11O14625 94 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 NPC1O15118 1278 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 TSPAN6O43657 245 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 SLC34A2O95436 690 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 INHAP05111 366 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 AVPR2P30518 371 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 GJA5P36382 358 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 PSMB10P40306 273 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 HTR5AP47898 357 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 PRKXP51817 358 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 BEX3Q00994 111 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 ILF3Q12906 894 aaKnown RBP eCLIP8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 SKP2Q13309 424 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 RPL13AP3Q6NVV1 102 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 GPRC5AQ8NFJ5 357 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 OR5AP2Q8NGF4 316 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 TMED6Q8WW62 240 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 C14orf144Q96I85 54 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 MEGF10Q96KG7 1140 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 ALX4Q9H161 411 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 RHOFQ9HBH0 211 aa8.66□□□□□ -1.02
SYNPO2-204ENST00000448416 RIIAD1A6NNX1 92 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 H7BY64 318 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SULT2B1O00204 365 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SFTA3P0C7M3 94 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 CALCBP10092 127 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 PAX6P26367 422 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 CD34P28906 385 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 MAPK8P45983 427 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 OR1G1P47890 313 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 CSNK1EP49674 416 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 FOXK2Q01167 660 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 FUT5Q11128 374 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 NUDT13Q86X67 352 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 POMGNT2Q8NAT1 580 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 RNASE11Q8TAA1 199 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 NUBPLQ8TB37 319 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SCAMP4Q969E2 229 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 UBE2E3Q969T4 207 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 F2RL3Q96RI0 385 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 ARHGDIGQ99819 225 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SSX3Q99909 188 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 TSPAN10Q9H1Z9 355 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 CWH43Q9H720 699 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SEC61A2Q9H9S3 476 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 FKRPQ9H9S5 495 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 CMC2Q9NRP2 79 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 GXYLT2A0PJZ3 443 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 MCIDASD6RGH6 385 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 BHLHE40O14503 412 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 CTNSO60931 367 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 IGSF6O95976 241 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 CD3DP04234 171 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 IL9P15248 144 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 NDUFB7P17568 137 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SPINT3P49223 89 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 TGIF1Q15583 401 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 VWA2Q5GFL6 755 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 ADAM5Q6NVV9 412 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 RPL22L1Q6P5R6 122 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 BAP18Q8IXM2 172 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF383Q8NA42 475 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SLAMF9Q96A28 289 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 RAB3CQ96E17 227 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 HS6ST2Q96MM7 605 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 MRI1Q9BV20 369 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 SLC7A7Q9UM01 511 aa8.65□□□□□ -1.02
SYNPO2-204ENST00000448416 A6NLC8 198 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 SLC31A2O15432 143 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 PRICKLE3O43900 615 aaPredicted RBP8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 APBA3O96018 575 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 RAB5CP51148 216 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 OR2B8PP59922 312 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 TGM3Q08188 693 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 CRMP1Q14194 572 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 PRRT3Q5FWE3 981 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 PRAMEF17Q5VTA0 474 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 PRSS55Q6UWB4 352 aaPredicted RBP8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 ARL14Q8N4G2 192 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 WDR34Q96EX3 536 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 LURAP1Q96LR2 239 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 LYSMD1Q96S90 227 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 GLIPR2Q9H4G4 154 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 SFXN1Q9H9B4 322 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 SIDT1Q9NXL6 827 aaKnown RBP8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 FBXO4Q9UKT5 387 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 PCDHGA1Q9Y5H4 931 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms