RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CBR4Q8N4T8 237 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 ABHD3Q8WU67 409 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 UCK2Q9BZX2 261 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 TP63Q9H3D4 680 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 MCCC2Q9HCC0 563 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 CLEC4AQ9UMR7 237 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZNF175Q9Y473 711 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 DIDO1Q9BTC0 2240 aaKnown RBP16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 HIVEP3Q5T1R4 2406 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 EI24O14681 340 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 MITFO75030 526 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 SOX14O95416 240 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 IGFBP1P08833 259 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 ADORA3P0DMS8 318 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZNF26P17031 533 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 GNLYP22749 145 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 UQCRC1P31930 480 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 UQCRFS1P47985 274 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 SLC9A3P48764 834 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 RPL18Q07020 188 aaKnown RBP16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZBED5Q49AG3 693 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 NSUN5P2Q63ZY6 315 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 ABLIM2Q6H8Q1 611 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 KLHL17Q6TDP4 642 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 SEM1Q6ZVN7 128 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 NCCRP1Q6ZVX7 275 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 GALNT5Q7Z7M9 940 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 IGFN1Q86VF2 1251 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 KIF18BQ86Y91 864 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 SCAIQ8N9R8 606 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 C9orf106Q8NAJ2 232 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 GALNT11Q8NCW6 608 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 EME1Q96AY2 570 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 SLC29A1Q99808 456 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 C9orf16Q9BUW7 83 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 CALHM2Q9HA72 323 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZNF556Q9HAH1 456 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 TAS2R5Q9NYW4 299 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 SIGLEC7Q9Y286 467 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 B3GALT5Q9Y2C3 310 aa16.05■□□□□ 0.16
TRAPPC4-203ENST00000447216 CD8B2A6NJW9 211 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 CYTIPO60759 359 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 PTP4A3O75365 173 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 SERPINI2O75830 405 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 OR6A2O95222 327 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 HLA-DOBP13765 273 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 AHCYP23526 432 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 PTGER4P35408 488 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 FXYD6P3P58550 94 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 RPS4XP62701 263 aaKnown RBP16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 PUDPQ08623 228 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 RASGEF1BQ0VAM2 473 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 DAG1Q14118 895 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 FBXW10Q5XX13 1052 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 TMEM225Q6GV28 225 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 THSD4Q6ZMP0 1018 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZBTB49Q6ZSB9 765 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 GPAT4Q86UL3 456 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 ADPRHL1Q8NDY3 354 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 FANK1Q8TC84 345 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 RNF128Q8TEB7 428 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 WNT2BQ93097 391 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZNF775Q96BV0 537 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 OSBPL10Q9BXB5 764 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 ENKD1Q9H0I2 346 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 EGLN3Q9H6Z9 239 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 REV1Q9UBZ9 1251 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 IL20RAQ9UHF4 553 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 TMEFF2Q9UIK5 374 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 HIF3AQ9Y2N7 669 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZNF462Q96JM2 2506 aa16.04■□□□□ 0.16
TRAPPC4-203ENST00000447216 CASQ2O14958 399 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 RNF13O43567 381 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 PLGP00747 810 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 TP53P04637 393 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 F13BP05160 661 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 HOXD4P09016 255 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 TSPAN19P0C672 248 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 CA7P43166 264 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 CASP6P55212 293 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 PPP2R2BQ00005 443 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 SF3B4Q15427 424 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 EIF2S3LQ2VIR3 472 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 KDM4DQ6B0I6 523 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 CD300LDQ6UXZ3 194 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 B3GNT6Q6ZMB0 384 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZNF620Q6ZNG0 422 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 RASSF6Q6ZTQ3 369 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 MARVELD2Q8N4S9 558 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 MAGEE2Q8TD90 523 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 NRG4Q8WWG1 115 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 SAMD8Q96LT4 415 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 OXGR1Q96P68 337 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 RBM4BQ9BQ04 359 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 RBM4Q9BWF3 364 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 OR52D1Q9H346 318 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 PAPOLBQ9NRJ5 636 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 KRT84Q9NSB2 600 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 B3GAT1Q9P2W7 334 aa16.03■□□□□ 0.16
TRAPPC4-203ENST00000447216 RASD1Q9Y272 281 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms