RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PFDN5Q99471 154 aa12.02□□□□□ -0.48
DDX56-206ENST00000446987 PPP4R1LQ9P1A2 415 aa12.02□□□□□ -0.48
DDX56-206ENST00000446987 LRIT1Q9P2V4 623 aa12.02□□□□□ -0.48
DDX56-206ENST00000446987 SLC9A8Q9Y2E8 581 aa12.02□□□□□ -0.48
DDX56-206ENST00000446987 TRBV23-1A0A0A0MS06 115 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 A0A0D9SG52 128 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 KIR2DS5A0A0G2JLQ3 304 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 A0A0G2JNG1 304 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 PRAMEF25A6NGN4 478 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 KIR2DS3K7RE56 304 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 IFNA10P01566 189 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 PNLIPP16233 465 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 AOAHP28039 575 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 HTR2AP28223 471 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 CSF2RBP32927 897 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 DUSP3P51452 185 aaPredicted RBP12.02□□□□□ -0.49
DDX56-206ENST00000446987 HHEXQ03014 270 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 CFHR1Q03591 330 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 ERV3-1Q14264 604 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 KIR2DS5Q14953 304 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 TRAM1Q15629 374 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 RPE65Q16518 533 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 MANEAQ5SRI9 462 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 TMEM88Q6PEY1 159 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 LRRC56Q8IYG6 542 aaPredicted RBP12.02□□□□□ -0.49
DDX56-206ENST00000446987 CFAP206Q8IYR0 622 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 ZNF561Q8N587 486 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 MEIOBQ8N635 442 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 SAMD12Q8N8I0 201 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 SMIM4Q8WVI0 70 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 GATAD2BQ8WXI9 593 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 INSM2Q96T92 566 aaPredicted RBP12.02□□□□□ -0.49
DDX56-206ENST00000446987 GHRLQ9UBU3 117 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 ZNF282Q9UDV7 671 aaPredicted RBP12.02□□□□□ -0.49
DDX56-206ENST00000446987 ZNF629Q9UEG4 869 aaPredicted RBP12.02□□□□□ -0.49
DDX56-206ENST00000446987 OPN4Q9UHM6 478 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 DHRS7Q9Y394 339 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 CBY1Q9Y3M2 126 aa12.02□□□□□ -0.49
DDX56-206ENST00000446987 ARPC5O15511 151 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 TAPBPO15533 448 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 SEMA7AO75326 666 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 PRKRAO75569 313 aaKnown RBP12.01□□□□□ -0.49
DDX56-206ENST00000446987 REM1O75628 298 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 NCR1O76036 304 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 LIMS3P0CW19 117 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 LIMS4P0CW20 117 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 MUC1P15941 1255 aaPredicted RBP12.01□□□□□ -0.49
DDX56-206ENST00000446987 SPINK2P20155 84 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 GCGRP47871 477 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 RNF144AP50876 292 aaPredicted RBP12.01□□□□□ -0.49
DDX56-206ENST00000446987 CCL7P80098 99 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 PDZK1IP1Q13113 114 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 GCNT6Q5T4J0 391 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 OR2G6Q5TZ20 316 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 ANXA8L1Q5VT79 327 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 OR5M10Q6IEU7 315 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 LINC00471Q8N535 108 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 SIDT2Q8NBJ9 832 aaKnown RBP12.01□□□□□ -0.49
DDX56-206ENST00000446987 C2CD4CQ8TF44 421 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 TSSK3Q96PN8 268 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 NRTNQ99748 197 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 OCSTAMPQ9BR26 566 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 SEC11CQ9BY50 192 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 CHIAQ9BZP6 476 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 NPFFR2Q9Y5X5 522 aa12.01□□□□□ -0.49
DDX56-206ENST00000446987 BLOC1S5-TXNDC5H3BN57 136 aa12□□□□□ -0.49
DDX56-206ENST00000446987 GPR37O15354 613 aa12□□□□□ -0.49
DDX56-206ENST00000446987 CLDN9O95484 217 aa12□□□□□ -0.49
DDX56-206ENST00000446987 KLK3P07288 261 aaPredicted RBP12□□□□□ -0.49
DDX56-206ENST00000446987 ABOP16442 354 aa12□□□□□ -0.49
DDX56-206ENST00000446987 SLC1A3P43003 542 aa12□□□□□ -0.49
DDX56-206ENST00000446987 OR1D5P58170 312 aa12□□□□□ -0.49
DDX56-206ENST00000446987 SMIM11AP58511 58 aa12□□□□□ -0.49
DDX56-206ENST00000446987 RNF4P78317 190 aa12□□□□□ -0.49
DDX56-206ENST00000446987 FOXC1Q12948 553 aa12□□□□□ -0.49
DDX56-206ENST00000446987 IL10RAQ13651 578 aa12□□□□□ -0.49
DDX56-206ENST00000446987 HES3Q5TGS1 186 aa12□□□□□ -0.49
DDX56-206ENST00000446987 OLFML2AQ68BL7 652 aa12□□□□□ -0.49
DDX56-206ENST00000446987 MRGPREQ86SM8 312 aa12□□□□□ -0.49
DDX56-206ENST00000446987 BMPERQ8N8U9 685 aa12□□□□□ -0.49
DDX56-206ENST00000446987 RNFT2Q96EX2 444 aa12□□□□□ -0.49
DDX56-206ENST00000446987 POT1Q9NUX5 634 aa12□□□□□ -0.49
DDX56-206ENST00000446987 KLK13Q9UKR3 277 aa12□□□□□ -0.49
DDX56-206ENST00000446987 PCDHB1Q9Y5F3 818 aa12□□□□□ -0.49
DDX56-206ENST00000446987 IGHV1OR21-1A0A087WYE8 117 aa12□□□□□ -0.49
DDX56-206ENST00000446987 LILRA5A6NI73 299 aa12□□□□□ -0.49
DDX56-206ENST00000446987 COLCA2A8K830 154 aa12□□□□□ -0.49
DDX56-206ENST00000446987 IGHV2-5P01817 119 aa12□□□□□ -0.49
DDX56-206ENST00000446987 IFNW1P05000 195 aa12□□□□□ -0.49
DDX56-206ENST00000446987 CD63P08962 238 aa12□□□□□ -0.49
DDX56-206ENST00000446987 EPB42P16452 691 aa12□□□□□ -0.49
DDX56-206ENST00000446987 AMD1P17707 334 aa12□□□□□ -0.49
DDX56-206ENST00000446987 AGAP20933 346 aa12□□□□□ -0.49
DDX56-206ENST00000446987 AGTR1P30556 359 aa12□□□□□ -0.49
DDX56-206ENST00000446987 HCCSP53701 268 aa12□□□□□ -0.49
DDX56-206ENST00000446987 CD81P60033 236 aa12□□□□□ -0.49
DDX56-206ENST00000446987 GPR18Q14330 331 aa12□□□□□ -0.49
DDX56-206ENST00000446987 PEA15Q15121 130 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms