RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 FAM83FQ8NEG4 500 aaPredicted RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR5J2Q8NH18 312 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 NEIL3Q8TAT5 605 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 SNX33Q8WV41 574 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR11A1Q9GZK7 315 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 CCDC86Q9H6F5 360 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 C12orf10Q9HB07 376 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC39A1Q9NY26 324 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 MYOTQ9UBF9 498 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF229Q9UJW7 825 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 VDAC3Q9Y277 283 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 PTRH2Q9Y3E5 179 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 CFAP54Q96N23 3096 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 A0A075B6Q4 140 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 LOC110117498-PIK3R3F6TDL0 507 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 PSMD9O00233 223 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 UPK1BO75841 260 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TFP02787 698 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 SDHAP31040 664 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 FGF9P31371 208 aaPredicted RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 C17orf67Q0P5P2 114 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 MADCAM1Q13477 382 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 C6orf183Q5T699 404 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TUBA3EQ6PEY2 450 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 CD200R1LQ6Q8B3 271 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TMEM205Q6UW68 189 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 VASH1Q7L8A9 365 aaPredicted RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 GRINAQ7Z429 371 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 GPALPP1Q8IXQ4 340 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC35F2Q8IXU6 374 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ARIH2OSQ8N7S6 290 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 BMPERQ8N8U9 685 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 LRRC75AQ8NAA5 344 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF511Q8NB15 262 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 LIPHQ8WWY8 451 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 LRFN5Q96NI6 719 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 GPX7Q96SL4 187 aaPredicted RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 SMAD5Q99717 465 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 NPAS1Q99742 590 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC30A2Q9BRI3 323 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 FKRPQ9H9S5 495 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 SACM1LQ9NTJ5 587 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 GNG8Q9UK08 70 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 RBMX2Q9Y388 322 aaKnown RBP8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 NUP210LQ5VU65 1888 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 FER1L5A0AVI2 2057 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 A0A0C4DFX4 3053 aa8.64□□□□□ -1.03
COL6A4P1-201ENST00000446690 TNRC6BQ9UPQ9 1833 aaKnown RBP8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 ARHGEF9O43307 516 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 RGS9O75916 674 aaPredicted RBP8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR6A2O95222 327 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 ONECUT2O95948 504 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 IGF2P01344 180 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 BGLAPP02818 100 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR2T7P0C7T2 308 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 UQCRC1P31930 480 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 TRA2AQ13595 282 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 ANGPT1Q15389 498 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 ARSKQ6UWY0 536 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 TMEM91Q6ZNR0 172 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 MAMDC2Q7Z304 686 aaPredicted RBP8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 FAM122BQ7Z309 247 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 POMGNT2Q8NAT1 580 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 GALNT6Q8NCL4 622 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR10G3Q8NGC4 313 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR2T27Q8NH04 317 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 TMEM234Q8WY98 164 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 TSPAN32Q96QS1 320 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 DDOQ99489 341 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 ALG12Q9BV10 488 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 NDEL1Q9GZM8 345 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC26A1Q9H2B4 701 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 METTL7AQ9H8H3 244 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 SIAEQ9HAT2 523 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 ABCB9Q9NP78 766 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 TAS2R5Q9NYW4 299 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 PLEKHB1Q9UF11 243 aaPredicted RBP8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 CMAHPQ9Y471 501 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 PCDHGB7Q9Y5F8 929 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 PCDHGB6Q9Y5F9 930 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 NOX1Q9Y5S8 564 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 TECTAO75443 2155 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 A0A1W2PRG6 482 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 A8MVM7 634 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 SHISA8B8ZZ34 492 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 C9J4A7 227 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 GLCEO94923 617 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 SNX4O95219 450 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 CELA2AP08217 269 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 CCKBRP32239 447 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 CENPAP49450 140 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 PSPHP78330 225 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 MC2RQ01718 297 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 BDH1Q02338 343 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 KRR1Q13601 381 aaKnown RBP8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 MESTQ5EB52 335 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 C1orf140Q5VVS0 124 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 STEAP3Q658P3 488 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms