RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 POMGNT2Q8NAT1 580 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 PERPQ96FX8 193 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 EPYCQ99645 322 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 ELAC2Q9BQ52 826 aaKnown RBP12.96□□□□□ -0.33
USE1-202ENST00000445667 B3GAT1Q9P2W7 334 aa12.96□□□□□ -0.33
USE1-202ENST00000445667 TEP1Q99973 2627 aaKnown RBP12.96□□□□□ -0.33
USE1-202ENST00000445667 RAI1Q7Z5J4 1906 aaPredicted RBP12.96□□□□□ -0.34
USE1-202ENST00000445667 SLC22A2O15244 555 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 UPK3AO75631 287 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 LYPD3O95274 346 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 COX4I1P13073 169 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 TNFRSF1BP20333 461 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 C1DQ13901 141 aaKnown RBP12.95□□□□□ -0.34
USE1-202ENST00000445667 ZNF672Q499Z4 452 aaPredicted RBP12.95□□□□□ -0.34
USE1-202ENST00000445667 LINC00114Q6XXX2 140 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 WDR88Q6ZMY6 472 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 LINGO2Q7L985 606 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 RP9Q8TA86 221 aaKnown RBP12.95□□□□□ -0.34
USE1-202ENST00000445667 ADAMTS16Q8TE57 1224 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 IGFBPL1Q8WX77 278 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 MOGAT1Q96PD6 335 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 TMEM43Q9BTV4 400 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 AMBRA1Q9C0C7 1298 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 SLC17A5Q9NRA2 495 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 GMPR2Q9P2T1 348 aaKnown RBP12.95□□□□□ -0.34
USE1-202ENST00000445667 LAMP3Q9UQV4 416 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 B3GALT5Q9Y2C3 310 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 ITPR3Q14573 2671 aa12.95□□□□□ -0.34
USE1-202ENST00000445667 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 SHISA9B4DS77 424 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 M0R1B8 84 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 ABCD4O14678 606 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 CHP2O43745 196 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 CCDC22O60826 627 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
USE1-202ENST00000445667 ZNF432O94892 652 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 HPRP00739 348 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 HLA-DOBP13765 273 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 NQO1P15559 274 aaKnown RBP12.94□□□□□ -0.34
USE1-202ENST00000445667 SLC25A3Q00325 362 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 TGFBR3Q03167 851 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 VEZF1Q14119 521 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 HIKESHIQ53FT3 197 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 SWT1Q5T5J6 900 aaKnown RBP12.94□□□□□ -0.34
USE1-202ENST00000445667 ERICH5Q6P6B1 374 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 SPATA21Q7Z572 469 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 CARM1Q86X55 608 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 TREML1Q86YW5 311 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 LRRC75A-AS1Q8N1F1 130 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 C1orf162Q8NEQ5 155 aaPredicted RBP12.94□□□□□ -0.34
USE1-202ENST00000445667 OR6S1Q8NH40 331 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 TMEM171Q8WVE6 324 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 RASSF5Q8WWW0 418 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 PROX1Q92786 737 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 FBXW5Q969U6 566 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 SLC41A3Q96GZ6 507 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 ALKBH3Q96Q83 286 aaPredicted RBP12.94□□□□□ -0.34
USE1-202ENST00000445667 FAM107BQ9H098 131 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 SLC7A7Q9UM01 511 aa12.94□□□□□ -0.34
USE1-202ENST00000445667 MAP1AP78559 2803 aaPredicted RBP12.94□□□□□ -0.34
USE1-202ENST00000445667 DSCAMO60469 2012 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 TRAPPC13A5PLN9 417 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 FAM220BPB1ANY3 271 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 ZNF587BE7ETH6 402 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 ARHGEF9O43307 516 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 SOD3P08294 240 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 DANCRP0C864 163 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 OR1E2P47887 323 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 GYS2P54840 703 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 SPOCK1Q08629 439 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 PMS2P3Q13401 168 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 MFSD13AQ14CX5 517 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 Q5PR19 223 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 SHEQ5VZ18 495 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 TTC33Q6PID6 262 aaPredicted RBP12.93□□□□□ -0.34
USE1-202ENST00000445667 KLHL17Q6TDP4 642 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 TMEM108Q6UXF1 575 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 SSX8Q7RTT4 187 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 ABHD12BQ7Z5M8 362 aaPredicted RBP12.93□□□□□ -0.34
USE1-202ENST00000445667 UEVLDQ8IX04 471 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 SLC15A3Q8IY34 581 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 MICU2Q8IYU8 434 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 OR2T12Q8NG77 320 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 SMAP2Q8WU79 429 aaPredicted RBP12.93□□□□□ -0.34
USE1-202ENST00000445667 ASPNQ9BXN1 380 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 CISD1Q9NZ45 108 aaKnown RBP12.93□□□□□ -0.34
USE1-202ENST00000445667 BAG5Q9UL15 447 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 AMDHD2Q9Y303 409 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 CORINQ9Y5Q5 1042 aa12.93□□□□□ -0.34
USE1-202ENST00000445667 LOC102725191A0A1B0GVB3 256 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 ELOVL7A1L3X0 281 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 KPNA4O00629 521 aaPredicted RBP12.92□□□□□ -0.34
USE1-202ENST00000445667 PLPP3O14495 311 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 TRAF3IP2O43734 574 aaPredicted RBP12.92□□□□□ -0.34
USE1-202ENST00000445667 SLC43A1O75387 559 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 CH25HO95992 272 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms