RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ZGRF1Q86YA3 2104 aa13.51□□□□□ -0.25
CCNE1-203ENST00000444983 A0A1W2PNV4 684 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 AHRRA9YTQ3 701 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 BLOC1S5-TXNDC5H3BN57 136 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 HIST1H2ABP04908 130 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 AQP2P41181 271 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 RAD23AP54725 363 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 PRPS1P60891 318 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 NPRL3Q12980 569 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 PMS2P3Q13401 168 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 RPL13AP3Q6NVV1 102 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 SMARCD3Q6STE5 483 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 HIST3H2AQ7L7L0 130 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 NANOGNBQ7Z5D8 188 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 CCDC103Q8IW40 242 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 SLC43A2Q8N370 569 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 MOSPD2Q8NHP6 518 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 CPT1CQ8TCG5 803 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 HIST1H2ACQ93077 130 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 MBOAT4Q96T53 435 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 GRIP2Q9C0E4 1043 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 PNPLA3Q9NST1 481 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 CAMK2AQ9UQM7 478 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 NDUFB2O95178 105 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 RCBTB2O95199 551 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 SOX14O95416 240 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 GTF2E2P29084 291 aaKnown RBP13.5□□□□□ -0.25
CCNE1-203ENST00000444983 CRISP1P54107 249 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 AQP4P55087 323 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 PUDPQ08623 228 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 WLSQ5T9L3 541 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 ABLIM2Q6H8Q1 611 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 PXKQ7Z7A4 578 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 FAM57AQ8TBR7 257 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 TOR3AQ9H497 397 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 NRIP3Q9NQ35 241 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 CLCF1Q9UBD9 225 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 ENOPH1Q9UHY7 261 aa13.5□□□□□ -0.25
CCNE1-203ENST00000444983 ING1Q9UK53 422 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-203ENST00000444983 POLEQ07864 2286 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 IGHV3-15A0A0B4J1V0 119 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 ZNF716A6NP11 495 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 CLCA1A8K7I4 914 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 MCIDASD6RGH6 385 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 BHLHE40O14503 412 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 CYTIPO60759 359 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 VAMP5O95183 116 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 ADORA3P0DMS8 318 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 GIPRP48546 466 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 CDK5Q00535 292 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 PON3Q15166 354 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 PTGES3Q15185 160 aaKnown RBP13.49□□□□□ -0.25
CCNE1-203ENST00000444983 POU4F3Q15319 338 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 Q6ZPB1 254 aaPredicted RBP13.49□□□□□ -0.25
CCNE1-203ENST00000444983 KDM8Q8N371 416 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 OR5M9Q8NGP3 310 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 FANK1Q8TC84 345 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 ROBO4Q8WZ75 1007 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 SAMD8Q96LT4 415 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 NAA11Q9BSU3 229 aaPredicted RBP13.49□□□□□ -0.25
CCNE1-203ENST00000444983 VCXQ9H320 206 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 IL20RAQ9UHF4 553 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 ZNF175Q9Y473 711 aa13.49□□□□□ -0.25
CCNE1-203ENST00000444983 CHD6Q8TD26 2715 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 RP1L1Q8IWN7 2480 aaPredicted RBP13.48□□□□□ -0.25
CCNE1-203ENST00000444983 ZAR1LA6NP61 321 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
CCNE1-203ENST00000444983 SLC16A6O15403 523 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 AQP8O94778 261 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 TGM6O95932 706 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 SLC16A1P53985 500 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 IL1RL1Q01638 556 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 SLC17A1Q14916 467 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 ZIK1Q3SY52 487 aaPredicted RBP13.48□□□□□ -0.25
CCNE1-203ENST00000444983 ALG10Q5BKT4 473 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 RTL6Q6ICC9 239 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 PLXDC2Q6UX71 529 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 GFRALQ6UXV0 394 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 DPY19L2P2Q6ZN68 376 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 FCRLAQ7L513 359 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 FAM122BQ7Z309 247 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 ST6GALNAC3Q8NDV1 305 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 FNDC9Q8TBE3 224 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 ZHX1-C8orf76Q96EF9 292 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 OXGR1Q96P68 337 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 SF3B5Q9BWJ5 86 aaKnown RBP13.48□□□□□ -0.25
CCNE1-203ENST00000444983 FAM118AQ9NWS6 357 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 MCTS1Q9ULC4 181 aaKnown RBP13.48□□□□□ -0.25
CCNE1-203ENST00000444983 RASD1Q9Y272 281 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 ORC6Q9Y5N6 252 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 ALPK2Q86TB3 2170 aa13.48□□□□□ -0.25
CCNE1-203ENST00000444983 IGKV3D-15A0A087WSY6 115 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 NPIPB13A6NJU9 1138 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 NPIPB4C9JG80 1138 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 H3BN98 237 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ARPC3O15145 178 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 WDR1O75083 606 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 F13BP05160 661 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 HLA-DOBP13765 273 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms