RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SLC19A2O60779 497 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 DNAJB6O75190 326 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 GP1BBP13224 206 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 OMPP47874 163 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 CDC42P60953 191 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 HOXC5Q00444 222 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 CARTPTQ16568 116 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 AADACL4Q5VUY2 407 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 COX15Q7KZN9 410 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 NUP54Q7Z3B4 507 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM200AQ86VY9 491 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC34A3Q8N130 599 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR4M1Q8NGD0 313 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR8J1Q8NGP2 316 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 MND1Q9BWT6 205 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 WWTR1Q9GZV5 400 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 ANKRA2Q9H9E1 313 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 ACOXLQ9NUZ1 547 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 CALML5Q9NZT1 146 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC5A6Q9Y289 635 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 A0A1W2PQ09 198 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 HMX3A6NHT5 357 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 VSTM2BA6NLU5 285 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR6C76A6NM76 312 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 HIST1H2ABP04908 130 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 IFNW1P05000 195 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 CXCR1P25024 350 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 THBS2P35442 1172 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 AGFG1P52594 562 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 MLF1P58340 268 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 FOXK1P85037 733 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF730Q6ZMV8 503 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 HIST3H2AQ7L7L0 130 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 STX19Q8N4C7 294 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR10G3Q8NGC4 313 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC7A6Q92536 515 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 HIST1H2ACQ93077 130 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 TM4SF19Q96DZ7 209 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 C11orf54Q9H0W9 315 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 DNAJC27Q9NZQ0 273 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 IL20RAQ9UHF4 553 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM131Q92545 1883 aa6.71□□□□□ -1.34
CDC42BPA-208ENST00000442054 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SOCS6O14544 535 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 EIF1AYO14602 144 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SC5DO75845 299 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MED26O95402 600 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 BTCP35070 178 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 FABP5Q01469 135 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 C1DQ13901 141 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SYPL1Q16563 259 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM205Q6UW68 189 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM91Q6ZNR0 172 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 PTCHD4Q6ZW05 846 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 C6orf120Q7Z4R8 191 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SULF2Q8IWU5 870 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF100Q8IYN0 542 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 GALNT11Q8NCW6 608 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 LILRB4Q8NHJ6 448 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SSC4DQ8WTU2 575 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 AMDHD1Q96NU7 426 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 GNRHR2Q96P88 292 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ATF6BQ99941 703 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 TSSK6Q9BXA6 273 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 GLIPR2Q9H4G4 154 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 GPR55Q9Y2T6 319 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 RBMX2Q9Y388 322 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ASB4Q9Y574 426 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ROS1P08922 2347 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 A0A0X1KG70 313 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 A0A1W2PS29 197 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MEIOCA2RUB1 952 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 FAM172BPA6NC97 362 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZG16O60844 167 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SOX30O94993 753 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 IFNA14P01570 189 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 BCHEP06276 602 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 CNR1P21554 472 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 HLA-DMAP28067 261 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 CENPAP49450 140 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 RPS25P62851 125 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 GALK2Q01415 458 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 CHRNEQ04844 493 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 TNK1Q13470 666 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 FHL1Q13642 323 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 PRR30Q53SZ7 412 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 XKRXQ6PP77 449 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 PM20D2Q8IYS1 436 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 TCTE3Q8IZS6 198 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR6T1Q8NGN1 323 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 FLVCR1-AS1Q8TAF5 88 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ASB5Q8WWX0 329 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF681Q96N22 645 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MS4A4EQ96PG1 132 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF607Q96SK3 696 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MESP1Q9BRJ9 268 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 RNF32Q9H0A6 362 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 FOLH1BQ9HBA9 442 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 CLN6Q9NWW5 311 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ENOPH1Q9UHY7 261 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms