RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SLC41A3Q96GZ6 507 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF845Q96IR2 970 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 LMF1Q96S06 567 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TEAD3Q99594 435 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 A4GALTQ9NPC4 353 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CEP290O15078 2479 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 OTOFQ9HC10 1997 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 PQLC2LA1A4F0 135 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 C5orf51A6NDU8 294 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 GABARAPH6UMI1 98 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 OR1F1O43749 312 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ARL6IP5O75915 188 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 NDUFB6O95139 128 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 NFATC1O95644 943 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 IGHA1P01876 353 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CD3DP04234 171 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 MPGP29372 298 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ID4P47928 161 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 DIO1P49895 249 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TAS2R20P59543 309 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 RPS27AP62979 156 aaKnown RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 UBA52P62987 128 aaKnown RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SKP1P63208 163 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 EFNB1P98172 346 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 RING1Q06587 406 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TGM3Q08188 693 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 HABP2Q14520 560 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 MAPK14Q16539 360 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 GALNTL5Q7Z4T8 443 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CAMKMTQ7Z624 323 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 DMRTC2Q8IXT2 367 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 FGF11Q92914 225 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CAPNS2Q96L46 248 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TMEM68Q96MH6 324 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ELF4Q99607 663 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TIMP4Q99727 224 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ULBP3Q9BZM4 244 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 UNKLQ9H9P5 680 aaKnown RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SIRT3Q9NTG7 399 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 MED9Q9NWA0 146 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 KLHL28Q9NXS3 571 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ABRACLQ9P1F3 81 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ANKRD36A6QL64 1941 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 KIAA0100Q14667 2235 aaKnown RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TRAV14DV4A0A0A6YYC5 116 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 FAM86C2PA6NEL3 165 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 OR5H14A6NHG9 310 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 IFNA4P05014 189 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 GSK3AP49840 483 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CEBPGP53567 150 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CASP6P55212 293 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SLC26A5P58743 744 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ST8SIA6P61647 398 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ID2Q02363 134 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF85Q03923 595 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 ZC3H14Q6PJT7 736 aaKnown RBP6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TAS1R1Q7RTX1 841 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 GDF7Q7Z4P5 450 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TAF8Q7Z7C8 310 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TPRA1Q86W33 373 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 RASGEF1AQ8N9B8 481 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 IL17RCQ8NAC3 791 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 OR52E2Q8NGJ4 325 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 OR1J2Q8NGS2 313 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 TM4SF18Q96CE8 201 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 UCN2Q96RP3 112 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 SELENOIQ9C0D9 397 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 PIGMQ9H3S5 423 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 GLIPR2Q9H4G4 154 aa6.93□□□□□ -1.3
HDAC9-214ENST00000441542 CENPVL1A0A0U1RR11 272 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 MED19A0JLT2 244 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CXorf65A6NEN9 183 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 UNC119BA6NIH7 251 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 BRINP1O60477 761 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR2A4O95047 310 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 YIF1AO95070 293 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SNAPINO95295 136 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CD2P06729 351 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SBK2P0C263 348 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ZGLP1P0C6A0 271 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 MPC1LP0DKB6 136 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF28P17035 718 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 MAKP20794 623 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 S100PP25815 95 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR1D2P34982 312 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SPINT3P49223 89 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 NR0B1P51843 470 aaKnown RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 RAG2P55895 527 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 USF2Q15853 346 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ABHD13Q7L211 337 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF627Q7L945 461 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 SSX9Q7RTT3 188 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CD163Q86VB7 1156 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CARFQ8N187 725 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR6K3Q8NGY3 331 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 PGLYRP3Q96LB9 341 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 OR2A7Q96R45 310 aa6.92□□□□□ -1.3
HDAC9-214ENST00000441542 CD180Q99467 661 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms