RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 ADGRL4Q9HBW9 690 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 DHCR7Q9UBM7 475 aaKnown RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 C19orf25Q9UFG5 118 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-209ENST00000440653 IL20RAQ9UHF4 553 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 CELSR1Q9NYQ6 3014 aa8.33□□□□□ -1.08
HDAC6-209ENST00000440653 CPAMD8Q8IZJ3 1885 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 ARPC4-TTLL3A0A0A6YYG9 625 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 OR6C70A6NIJ9 312 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 FAM183AA6NL82 134 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 GABRPO00591 440 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 RGS5O15539 181 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TBX1O43435 398 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 RNF13O43567 381 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TSPAN2O60636 221 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 ADAM11O75078 769 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 ICOSLGO75144 302 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 APOL3O95236 402 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TXNDC12O95881 172 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 ONECUT2O95948 504 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 HNRNPCP07910 306 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 OR2T7P0C7T2 308 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 FAM87AP0C7U9 286 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 FOLR1P15328 257 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 CELP19835 753 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 MYL9P24844 172 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 COL8A1P27658 744 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 GRNP28799 593 aaKnown RBP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 SDHAP31040 664 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 RPL4P36578 427 aaKnown RBP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 RPS19P39019 145 aaKnown RBP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 HTR3AP46098 478 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 CENPAP49450 140 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TMED10P49755 219 aaKnown RBP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 SLC16A1P53985 500 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 SLC26A5P58743 744 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 FHL1Q13642 323 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 CBFBQ13951 182 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 SHBQ15464 509 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 NSDHLQ15738 373 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 CD226Q15762 336 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF74Q16587 644 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 CCDC58Q4VC31 144 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 SNAP47Q5SQN1 464 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TRILQ7L0X0 811 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 SHFQ7M4L6 423 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 LHFPL3Q86UP9 236 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 JAZF1Q86VZ6 243 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TPRA1Q86W33 373 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 MS4A15Q8N5U1 240 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TMEM99Q8N816 258 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 GDPD1Q8N9F7 314 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 OR2T27Q8NH04 317 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 OR4C3Q8NH37 302 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 OR6S1Q8NH40 331 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 OR8K3Q8NH51 312 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 OR51A7Q8NH64 312 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF563Q8TA94 476 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 NUBPLQ8TB37 319 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 PHYHIPQ92561 330 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 EXTL1Q92935 676 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 NACC2Q96BF6 587 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TRMT61AQ96FX7 289 aaKnown RBP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 TEAD3Q99594 435 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 NUDT22Q9BRQ3 303 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 MMP25Q9NPA2 562 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 NRIP3Q9NQ35 241 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 NANSQ9NR45 359 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 ABCB10Q9NRK6 738 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 SNTG1Q9NSN8 517 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 RHBDL2Q9NX52 303 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 BABAM2Q9NXR7 383 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 NXT1Q9UKK6 140 aaKnown RBP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 RARRES3Q9UL19 164 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 PPIEQ9UNP9 301 aaKnown RBP8.32□□□□□ -1.08
HDAC6-209ENST00000440653 MOKQ9UQ07 419 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 HEATR5AQ86XA9 2040 aa8.32□□□□□ -1.08
HDAC6-209ENST00000440653 MPDZO75970 2070 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 PCNX1Q96RV3 2341 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 IGKV1D-42A0A075B6H8 117 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 MCIDASD6RGH6 385 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 PHYHO14832 338 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 CASKO14936 926 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 EFSO43281 561 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 NDUFB5O43674 189 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 PLPP2O43688 288 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 GPRIN2O60269 458 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 SLC19A2O60779 497 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 TRIM3O75382 744 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-209ENST00000440653 REM1O75628 298 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 LDOC1O95751 146 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-209ENST00000440653 CD14P08571 375 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 FUT1P19526 365 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 PTNP21246 168 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 UQCRC1P31930 480 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 EVI2BP34910 448 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 DUSP3P51452 185 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-209ENST00000440653 FABP5Q01469 135 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF117Q03924 483 aa8.31□□□□□ -1.08
HDAC6-209ENST00000440653 TRA2AQ13595 282 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms