RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 KIR3DX1Q9H7L2 352 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC28A3Q9HAS3 691 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 BCL2L10Q9HD36 194 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 PALMDQ9NP74 551 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACOT13Q9NPJ3 140 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 LHX9Q9NQ69 397 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 FKBP14Q9NWM8 211 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 PAK1IP1Q9NWT1 392 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 LYARQ9NX58 379 aaKnown RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 CHCHD3Q9NX63 227 aaKnown RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 TEX10Q9NXF1 929 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 PSORS1C1Q9UIG5 152 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 ENPP5Q9UJA9 477 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 FBXW2Q9UKT8 454 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 DUSP12Q9UNI6 340 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 MGAT4BQ9UQ53 548 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 ASB4Q9Y574 426 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 MAU2Q9Y6X3 613 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 A3GALT2U3KPV4 340 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 MTCL1Q9Y4B5 1905 aaKnown RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 MUC22E2RYF6 1773 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 NOTCH4Q99466 2003 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 IGHV4-28A0A0C4DH34 117 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 IGKV1-8A0A0C4DH67 115 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A0G2JN53 185 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A0G2JPF8 293 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A0J9YVX5 310 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 EFCAB10A6NFE3 127 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 EPOPA6NHQ4 379 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 LRRC72A6NJI9 287 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 A6NL46 340 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLDN24A6NM45 220 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR52A4PA6NMU1 304 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 HNRNPCL2B2RXH8 293 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 HNRNPCL3B7ZW38 293 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ANHXE9PGG2 379 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMX2-CTNND1H3BSU7 103 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TLR4O00206 839 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAAHO00519 579 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 FFAR1O14842 300 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 HAT1O14929 419 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PGRMC2O15173 223 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OGG1O15527 345 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZW10O43264 779 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 EMC8O43402 210 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 LATO43561 262 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR10H3O60404 316 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 FMO6PO60774 539 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 B4GALT2O60909 372 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLPXO76031 633 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 GABARAPO95166 117 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 KLF8O95600 359 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZBTB11O95625 1053 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 EGFP01133 1207 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CDK1P06493 297 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 H1F0P07305 194 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 FHP07954 510 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 HNRNPCL4P0DMR1 293 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 POU2F1P14859 743 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CD36P16671 472 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF12P17014 697 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ANXA7P20073 488 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 HIST1H1TP22492 207 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CBLP22681 906 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ATP5A1P25705 553 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PEBP1P30086 187 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PPP2R1BP30154 601 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 MAT2AP31153 395 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 MPIP34949 423 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TSFMP43897 325 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 IDH2P48735 452 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLK1P49759 484 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 KHKP50053 298 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 BMXP51813 675 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CRISP3P54108 245 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 UGT2B15P54855 530 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 LIM2P55344 173 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMPRSS3P57727 454 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 STXBP1P61764 594 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 BTN3A2P78410 334 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 RGS1Q08116 209 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 COX10Q12887 443 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ILKQ13418 452 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMED1Q13445 227 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 AQP6Q13520 282 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 GANABQ14697 944 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF846Q147U1 533 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 KIR2DS3Q14952 304 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 MAPK11Q15759 364 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 CTF1Q16619 201 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 DUSP7Q16829 419 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF674Q2M3X9 581 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ESCO2Q56NI9 601 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 IGSF11Q5DX21 431 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRAMEF8Q5VWM4 474 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRAMEF7Q5VXH5 474 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLX4IPQ5VYV7 408 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 FRMPD2BQ6IN97 320 aa3.12□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF770Q6IQ21 691 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms