RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 GALNT9Q9HCQ5 603 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CHCHD3Q9NX63 227 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SIGLEC7Q9Y286 467 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 GPR52Q9Y2T5 361 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ZNF337Q9Y3M9 751 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 MPDZO75970 2070 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 C2orf72A6NCS6 295 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 NPIPA5E9PKD4 350 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 H3BMQ9 156 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 KLRC4-KLRK1H3BQV0 150 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TP53I11O14683 189 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MYL12BO14950 172 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 NDUFB2O95178 105 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PPP1R3DO95685 299 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 IGF2P01344 180 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 IFNGP01579 166 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ZNF24P17028 368 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MYL12AP19105 171 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 CCNA2P20248 432 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 CXCR1P25024 350 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TACR3P29371 465 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PEX19P40855 299 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PTGDSP41222 190 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 SUMO3P55854 103 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PLGLB1Q02325 96 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 FOXO1Q12778 655 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 IRF3Q14653 427 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TIGD6Q17RP2 521 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 CXXC5Q7LFL8 322 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ERI1Q8IV48 349 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 LNX2Q8N448 690 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 FAM98AQ8NCA5 519 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 RNFT2Q96EX2 444 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 JSRP1Q96MG2 331 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 COG8Q96MW5 612 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 DOK1Q99704 481 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 SLX1AQ9BQ83 275 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 FAM173AQ9BQD7 235 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 BCL7BQ9BQE9 202 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TTTY12Q9BZ98 90 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 RACGAP1Q9H0H5 632 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 METTL7AQ9H8H3 244 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 KLRF1Q9NZS2 232 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ENPP5Q9UJA9 477 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 NPIPA1Q9UND3 350 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ERGIC3Q9Y282 383 aa13.14□□□□□ -0.31
TNFRSF1A-204ENST00000440083 USP9XQ93008 2570 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 POLEQ07864 2286 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 BHLHE40O14503 412 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 CRYABP02511 175 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ZNF3P17036 446 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 HK1P19367 917 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PAICSP22234 425 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 GNLYP22749 145 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 NOS3P29474 1203 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 RPL4P36578 427 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 CASP3P42574 277 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 POLR2HP52434 150 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 EFNB1P98172 346 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 HSF1Q00613 529 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 C17orf67Q0P5P2 114 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 RAB40BQ12829 278 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 C1DQ13901 141 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 NXNL2Q5VZ03 156 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 P2RY8Q86VZ1 359 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ANKRD13BQ86YJ7 626 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ZFP62Q8NB50 900 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TMEM234Q8WY98 164 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 YIPF6Q96EC8 236 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MND1Q9BWT6 205 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 NAA50Q9GZZ1 169 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MCCC2Q9HCC0 563 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 SDHAF3Q9NRP4 125 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TAS2R10Q9NYW0 307 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ZGRF1Q86YA3 2104 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 NCKAP5O14513 1909 aa13.13□□□□□ -0.31
TNFRSF1A-204ENST00000440083 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ZNF407Q9C0G0 2248 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 FAM47E-STBD1D6RA91 191 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PRR23D1E9PI22 279 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 J3QKU1 62 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ADAM10O14672 748 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TFECO14948 347 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PTP4A3O75365 173 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PTHP01270 115 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 CELA3AP09093 270 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 RFPL3SP0C7P2 107 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PRR23D2P0DMB1 279 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 HTR3AP46098 478 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MTNR1AP48039 350 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 FXYD6P3P58550 94 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 QPRTQ15274 297 aa13.12□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MED22Q15528 200 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms