RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TUBAL3A6NHL2 446 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 PRSS44E7EML9 344 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 H7C1C5 153 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 FARS2O95363 451 aaKnown RBP12.27□□□□□ -0.44
ACTN1-204ENST00000438964 WDPCPO95876 746 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 CAPZA2P47755 286 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 NPBWR1P48145 328 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 VASPP50552 380 aaPredicted RBP12.27□□□□□ -0.44
ACTN1-204ENST00000438964 RAB13P51153 203 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 LCN6P62502 163 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 TGIF1Q15583 401 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 NKPD1Q17RQ9 610 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 MPP7Q5T2T1 576 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 RAB12Q6IQ22 244 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 MFSD12Q6NUT3 480 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 OR2W3Q7Z3T1 314 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 METTL3Q86U44 580 aaKnown RBP12.27□□□□□ -0.44
ACTN1-204ENST00000438964 AMZ2Q86W34 360 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 SLC35F2Q8IXU6 374 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 GIMAP5Q96F15 307 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 LMF1Q96S06 567 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 COA4Q9NYJ1 87 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 DHCR7Q9UBM7 475 aaKnown RBP12.27□□□□□ -0.44
ACTN1-204ENST00000438964 SLC35A3Q9Y2D2 325 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 FAM96BQ9Y3D0 163 aa12.27□□□□□ -0.44
ACTN1-204ENST00000438964 LRRK1Q38SD2 2015 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TRAV8-7A0A075B6U6 113 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 OR6C65A6NJZ3 312 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 ABCD4O14678 606 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 SPINT1O43278 529 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 GMFGO60234 142 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 FADS1O60427 444 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 NDUFS6O75380 124 aaKnown RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 ECDO95905 644 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 CPN1P15169 458 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 MEOX2P50222 304 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 EXOSC7Q15024 291 aaKnown RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 NNATQ16517 81 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TMPRSS9Q7Z410 1059 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 DCUN1D3Q8IWE4 304 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 BEST3Q8N1M1 668 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TRMT2BQ96GJ1 504 aaKnown RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 CTSFQ9UBX1 484 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TRAV1-2A0A0B4J238 106 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 ZNF705EA8MWA4 302 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 MCIDASD6RGH6 385 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 SGCEO43556 437 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 LDB3O75112 727 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 GMFBP60983 142 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 BLOC1S1P78537 153 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TMEM205Q6UW68 189 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 OR56A1Q8NGH5 318 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 SETD7Q8WTS6 366 aaKnown RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 VRK1Q99986 396 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TINAGL1Q9GZM7 467 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TCF7L1Q9HCS4 588 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 NCDNQ9UBB6 729 aa12.27□□□□□ -0.45
ACTN1-204ENST00000438964 ZNF223Q9UK11 482 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-204ENST00000438964 TRAPPC13A5PLN9 417 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 TVP23AA6NH52 213 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 AGPAT2O15120 278 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 EIF3GO75821 320 aaKnown RBP eCLIP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 RBBP9O75884 186 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 CRYBA1P05813 215 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 CNR1P21554 472 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 EPHA4P54764 986 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 TAS2R43P59537 309 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 SNRPEP62304 92 aaKnown RBP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 REEP5Q00765 189 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 KRT33BQ14525 404 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 RHOUQ7L0Q8 258 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 DPPA4Q7L190 304 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 ASPGQ86U10 573 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 MCATQ8IVS2 390 aaKnown RBP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 CDK20Q8IZL9 346 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 THAP6Q8TBB0 222 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 MS4A6EQ96DS6 147 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 C19orf43Q9BQ61 176 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 TLNRD1Q9H1K6 362 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 SPHK1Q9NYA1 384 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 ZNF780BQ9Y6R6 833 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 HEATR5AQ86XA9 2040 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 GRXCR1A8MXD5 290 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 CTNSO60931 367 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 SLC2A5P22732 501 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 HTRA4P83105 476 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 TDGQ13569 410 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 PLEKHN1Q494U1 663 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 TCEAL5Q5H9L2 206 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 RNF44Q7L0R7 432 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 BIVMQ86UB2 503 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 OR1J2Q8NGS2 313 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 OR2L2Q8NH16 312 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 OR14A16Q8NHC5 309 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms