RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SP1P08047 785 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 MELTFP08582 738 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 H2BFMP0C1H6 154 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 XRCC1P18887 633 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CA4P22748 312 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ME2P23368 584 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 SERPINB1P30740 379 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RBM34P42696 430 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 BRCC3P46736 316 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 IDH2P48735 452 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CX3CR1P49238 355 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ERFP50548 548 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZP1P60852 638 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PSME3P61289 254 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ISL1P61371 349 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CKAP4Q07065 602 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 C2orf80Q0P641 193 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PDIA2Q13087 525 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 MAD2L1BPQ15013 274 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PSG5Q15238 335 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNHIT3Q15649 155 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 NDUFA5Q16718 116 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PHKG1Q16816 387 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CHRFAM7AQ494W8 412 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM52BQ4KMG9 183 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 AKIRIN2Q53H80 203 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 AWAT1Q58HT5 328 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 DMRTC1Q5HYR2 192 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PDSS1Q5T2R2 415 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR2G6Q5TZ20 316 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ASPHD1Q5U4P2 390 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 MEDAGQ5VYS4 303 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PRR5LQ6MZQ0 368 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PNCKQ6P2M8 343 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 FAHD1Q6P587 224 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 KCTD18Q6PI47 426 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RBM44Q6ZP01 1051 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 USP43Q70EL4 1123 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 AHSA2Q719I0 299 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ASRGL1Q7L266 308 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR2W3Q7Z3T1 314 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC39A11Q8N1S5 342 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ELMOD1Q8N336 334 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM251Q8N6I4 163 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 KLHDC1Q8N7A1 406 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ACBD4Q8NC06 268 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR4K2Q8NGD2 314 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR13C5Q8NGS8 318 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR5R1Q8NH85 324 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR2V1Q8NHB1 315 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RDH11Q8TC12 318 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RNASEH2CQ8TDP1 164 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 FAM172AQ8WUF8 416 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 DYDC1Q8WWB3 177 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 C22orf15Q8WYQ4 148 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RORBQ92753 470 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PTH2Q96A98 100 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM18Q96B42 140 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 FAF2Q96CS3 445 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 SGTBQ96EQ0 304 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RMND5BQ96G75 393 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PCED1BQ96HM7 432 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF419Q96HQ0 510 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CCDC42Q96M95 316 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 WFIKKN1Q96NZ8 548 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ATP5SQ99766 215 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 EBNA1BP2Q99848 306 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 MICU1Q9BPX6 476 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 MAPKAP1Q9BPZ7 522 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 TM2D2Q9BX73 214 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CALN1Q9BXU9 219 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CIPCQ9C0C6 399 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ACTR3CQ9C0K3 210 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 DEFB129Q9H1M3 183 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PPA2Q9H2U2 334 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 CPVLQ9H3G5 476 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RNF121Q9H920 327 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 BEX1Q9HBH7 125 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 PLGRKTQ9HBL7 147 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 GDF3Q9NR23 364 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 NLE1Q9NVX2 485 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 RNF186Q9NXI6 227 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF319Q9P2F9 582 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 GHRLQ9UBU3 117 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 OPN4Q9UHM6 478 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC12A6Q9UHW9 1150 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF221Q9UK13 617 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC17A4Q9Y2C5 497 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 YARS2Q9Y2Z4 477 aaKnown RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 UBN2Q6ZU65 1347 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 STK36Q9NRP7 1315 aa3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 FNDC1Q4ZHG4 1894 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P12-201ENST00000438594 ROCK2O75116 1388 aaKnown RBP3.15□□□□□ -1.9
HMGB1P12-201ENST00000438594 MED19A0JLT2 244 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC22A23A1A5C7 686 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCDC182A6NF36 153 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 NKX6-3A6NJ46 265 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR2AT4A6NND4 320 aa3.15□□□□□ -1.91
HMGB1P12-201ENST00000438594 A8MX80 341 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms