RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RASD1Q9Y272 281 aa3.5□□□□□ -1.85
HMGB1P45-201ENST00000435986 RHBDD3Q9Y3P4 386 aa3.5□□□□□ -1.85
HMGB1P45-201ENST00000435986 SNED1Q8TER0 1413 aa3.5□□□□□ -1.85
HMGB1P45-201ENST00000435986 CFAP65Q6ZU64 1925 aaKnown RBP3.5□□□□□ -1.85
HMGB1P45-201ENST00000435986 RPAP1Q9BWH6 1393 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P45-201ENST00000435986 A0A1B0GUH1 482 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 SMCO3A2RU48 225 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 PP2D1A8MPX8 630 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 BCKDKO14874 412 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CALUO43852 315 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TIMM8AO60220 97 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 SCRG1O75711 98 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 AP2A1O95782 977 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CA1P00915 261 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CRYGBP07316 175 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CCNOP22674 350 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 GDF1P27539 372 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 FGF9P31371 208 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CD80P33681 288 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 P2RY1P47900 373 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TPMTP51580 245 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CDH6P55285 790 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TNNC1P63316 161 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 DR1Q01658 176 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TMEM107Q6UX40 140 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 FRA10AC1Q70Z53 315 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CDC20BQ86Y33 519 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 ST13P4Q8IZP2 240 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TMEM123Q8N131 208 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 GTPBP8Q8N3Z3 284 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 KIR3DL3Q8N743 410 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 FAM83FQ8NEG4 500 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 OR51G2Q8NGK0 314 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 CDC26Q8NHZ8 85 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 HTR3CQ8WXA8 447 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TNFRSF14Q92956 283 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TOP1MTQ969P6 601 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 PELI1Q96FA3 418 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 SEC22AQ96IW7 307 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TECTBQ96PL2 329 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TGS1Q96RS0 853 aaKnown RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 COPS8Q99627 209 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 OSBPL10Q9BXB5 764 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 LRRN3Q9H3W5 708 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 MRPL47Q9HD33 250 aaKnown RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 MIEF1Q9NQG6 463 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 C20orf96Q9NUD7 363 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 MTCH1Q9NZJ7 389 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 HMGXB4Q9UGU5 601 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 DCDC2Q9UHG0 476 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 TMCO1Q9UM00 188 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 PRPF19Q9UMS4 504 aaKnown RBP3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 SCML2Q9UQR0 700 aa3.49□□□□□ -1.85
HMGB1P45-201ENST00000435986 A0A1B0GVL5 298 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 LRP5LA4QPB2 252 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 TRPC5OSA6NMA1 111 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 A8MXQ7 604 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 HDAC3O15379 428 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 ZNF354AO60765 605 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 GPX5O75715 221 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 ATP5HO75947 161 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 MYO1DO94832 1006 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 H6PDO95479 791 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 TSPAN12O95859 305 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 ERCC1P07992 297 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 CCNB1P14635 433 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 TNNI1P19237 187 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 GCAP28676 217 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 HOXA6P31267 233 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 OTX1P32242 354 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 KIR2DS2P43631 304 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 CCT3P49368 545 aaKnown RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 CSRP3P50461 194 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 DAP3P51398 398 aaKnown RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 EFNB2P52799 333 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 SKP1P63208 163 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 LRRC63Q05C16 580 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 ITGB3BPQ13352 177 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 RCAN2Q14206 197 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 ARL6IP1Q15041 203 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 CCDC14Q49A88 953 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 PAN3Q58A45 887 aaKnown RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 FAM120AOSQ5T036 256 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 TMEM220Q6QAJ8 160 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 TFAP2EQ6VUC0 442 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 NDUFAF7Q7L592 441 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 COPS6Q7L5N1 327 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 MOB1BQ7L9L4 216 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 ARCQ7LC44 396 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 CDKL3Q8IVW4 592 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 NAXDQ8IW45 347 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 OR13C9Q8NGT0 318 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 SLC38A4Q969I6 547 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 CHMP6Q96FZ7 201 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 FOXN4Q96NZ1 517 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 ZNF317Q96PQ6 595 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 CLCC1Q96S66 551 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 KIR2DL4Q99706 377 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 TSG101Q99816 390 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms