RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PLPP3O14495 311 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 RNF13O43567 381 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 KALRNO60229 2985 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 CYTIPO60759 359 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 TOXO94900 526 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 TMIGD3P0DMS9 266 aaPredicted RBP13.68□□□□□ -0.22
CNOT9-205ENST00000433439 AQP2P41181 271 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 H3F3AP84243 136 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 FOXF2Q12947 444 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 GK3PQ14409 553 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 ANKRD34AQ69YU3 496 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 ABLIM2Q6H8Q1 611 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 C1orf94Q6P1W5 598 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 SHQ1Q6PI26 577 aaKnown RBP13.68□□□□□ -0.22
CNOT9-205ENST00000433439 ZDHHC13Q8IUH4 622 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 CNEP1R1Q8N9A8 125 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 SCAIQ8N9R8 606 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 MOSPD2Q8NHP6 518 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 MBD3L2Q8NHZ7 208 aaPredicted RBP13.68□□□□□ -0.22
CNOT9-205ENST00000433439 RND1Q92730 232 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 SDCCAG3Q96C92 435 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 DMRTA2Q96SC8 542 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 FEVQ99581 238 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 RNF122Q9H9V4 155 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 KLHL9Q9P2J3 617 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 RASD1Q9Y272 281 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 RRP15Q9Y3B9 282 aaKnown RBP13.68□□□□□ -0.22
CNOT9-205ENST00000433439 ARHGAP21Q5T5U3 1957 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 NBASA2RRP1 2371 aa13.68□□□□□ -0.22
CNOT9-205ENST00000433439 HTR3EA5X5Y0 456 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 MS4A18H0YCH9 400 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 RCBTB2O95199 551 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 HPRP00739 348 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 IGF2P01344 180 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 F13BP05160 661 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 ANPEPP15144 967 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 TIMP3P35625 211 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 RPL4P36578 427 aaKnown RBP13.67□□□□□ -0.22
CNOT9-205ENST00000433439 P2RY4P51582 365 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 RPL18Q07020 188 aaKnown RBP13.67□□□□□ -0.22
CNOT9-205ENST00000433439 PUDPQ08623 228 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 RNPS1Q15287 305 aaKnown RBP13.67□□□□□ -0.22
CNOT9-205ENST00000433439 MS4A18Q3C1V0 323 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 C4orf17Q53FE4 359 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 TMEM201Q5SNT2 666 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 EEF1A1P5Q5VTE0 462 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 OR2A2Q6IF42 318 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 ZNF770Q6IQ21 691 aaPredicted RBP13.67□□□□□ -0.22
CNOT9-205ENST00000433439 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 HIPK1Q86Z02 1210 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 CCDC71Q8IV32 467 aaPredicted RBP13.67□□□□□ -0.22
CNOT9-205ENST00000433439 UEVLDQ8IX04 471 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 TUSC5Q8IXB3 177 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 NAXEQ8NCW5 288 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 OR9K2Q8NGE7 335 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 OXGR1Q96P68 337 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 NIPSNAP1Q9BPW8 284 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 PSD2Q9BQI7 771 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 C12orf49Q9H741 205 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 ZNF556Q9HAH1 456 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 TAS2R5Q9NYW4 299 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 IL20RAQ9UHF4 553 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 OAZ3Q9UMX2 235 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 MGAT4BQ9UQ53 548 aa13.67□□□□□ -0.22
CNOT9-205ENST00000433439 MYO7BQ6PIF6 2116 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 A0A0G2JNJ9 132 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 ZNF716A6NP11 495 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 PDLIM1O00151 329 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 HLA-DOBP13765 273 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 ZNF43P17038 809 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 FPR3P25089 353 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 GSSP48637 474 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 SLC9A3P48764 834 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 CLDN17P56750 224 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 POU3F1Q03052 451 aaPredicted RBP13.66□□□□□ -0.22
CNOT9-205ENST00000433439 TSPAN31Q12999 210 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 ZBED5Q49AG3 693 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 RIPPLY2Q5TAB7 128 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.66□□□□□ -0.22
CNOT9-205ENST00000433439 SVOPLQ8N434 492 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 FANK1Q8TC84 345 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 LIPHQ8WWY8 451 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 NRBF2Q96F24 287 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 CCDC120Q96HB5 630 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 GMPPAQ96IJ6 420 aaPredicted RBP13.66□□□□□ -0.22
CNOT9-205ENST00000433439 CIB1Q99828 191 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 SMURF2Q9HAU4 748 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 MCCC2Q9HCC0 563 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 EMC3Q9P0I2 261 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 Q9UFV3 132 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 PHF3Q92576 2039 aaKnown RBP13.66□□□□□ -0.22
CNOT9-205ENST00000433439 MED12LQ86YW9 2145 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 DOCK7Q96N67 2140 aa13.66□□□□□ -0.22
CNOT9-205ENST00000433439 RP1L1Q8IWN7 2480 aaPredicted RBP13.65□□□□□ -0.22
CNOT9-205ENST00000433439 KLF4O43474 513 aa13.65□□□□□ -0.22
CNOT9-205ENST00000433439 FZD7O75084 574 aa13.65□□□□□ -0.22
CNOT9-205ENST00000433439 SMNDC1O75940 238 aaKnown RBP eCLIP13.65□□□□□ -0.22
CNOT9-205ENST00000433439 VAMP5O95183 116 aa13.65□□□□□ -0.22
CNOT9-205ENST00000433439 SOX14O95416 240 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms