RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TPGS2Q68CL5 300 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 TMEM64Q6YI46 380 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 PARS2Q7L3T8 475 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 AMZ2Q86W34 360 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 NPAS4Q8IUM7 802 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 STEAP2Q8NFT2 490 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF106Q9H2Y7 1883 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 IL21Q9HBE4 155 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 C14orf105Q9NVL8 296 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 FBXO34Q9NWN3 711 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 FARSAQ9Y285 508 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ADAM18Q9Y3Q7 739 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 IER3IP1Q9Y5U9 82 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ARID1BQ8NFD5 2236 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 A0A1B0GTH9 108 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 RPN2P04844 631 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ELNP15502 786 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF136P52737 540 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ST8SIA6P61647 398 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ACTA2P62736 377 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ACTG2P63267 376 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 IL10RAQ13651 578 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 OR7A5Q15622 319 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 SCGB2B2Q4G0G5 96 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 RBMS3Q6XE24 437 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 CACUL1Q86Y37 369 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNRF4Q8WWF5 429 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 FBXO17Q96EF6 278 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 SAGE1Q9NXZ1 904 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 NCDNQ9UBB6 729 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF346Q9UL40 294 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 NOP16Q9Y3C1 178 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 SCN3AQ9NY46 2000 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 SULT1B1O43704 296 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 PAPLNO95428 1278 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 RAB40ALP0C0E4 278 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 OR2T7P0C7T2 308 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 RFC3P40938 356 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 FLT3LGP49771 235 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 NANOS3P60323 173 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF528Q3MIS6 628 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 MOB3CQ70IA8 216 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 LRRTM1Q86UE6 522 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 EID2Q8N6I1 236 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 OR7G2Q8NG99 324 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 OR2T27Q8NH04 317 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 RAB40AQ8WXH6 277 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 NUS1Q96E22 293 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 PTCHD1Q96NR3 888 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 NMNAT3Q96T66 252 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 TLNRD1Q9H1K6 362 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 PIGMQ9H3S5 423 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 BARX1Q9HBU1 254 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 MEPEQ9NQ76 525 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF337Q9Y3M9 751 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 TRBV23-1A0A0A0MS06 115 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 OR6C76A6NM76 312 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 M0QYG6 137 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 RD3LP0DJH9 198 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 RORAP35398 523 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 DLSTP36957 453 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 PPIAP62937 165 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 BTN3A2P78410 334 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 REEP5Q00765 189 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 DUSP5Q16690 384 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 STAC2Q6ZMT1 411 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 DPPA4Q7L190 304 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 OR51D1Q8NGF3 324 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 OR2L2Q8NH16 312 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC22A8Q8TCC7 542 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 RXFP4Q8TDU9 374 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 MIB2Q96AX9 1013 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 DTD2Q96FN9 168 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 OR52A5Q9H2C5 316 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 PELI2Q9HAT8 420 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 TRPV4Q9HBA0 871 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 APMAPQ9HDC9 416 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 MRPS30Q9NP92 439 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 MYEF2Q9P2K5 600 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF629Q9UEG4 869 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 KCNK7Q9Y2U2 307 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF281Q9Y2X9 895 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 TBC1D3EA0A087X179 549 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 A0A0D9SG52 128 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ADCYAP1P18509 176 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 NPBWR1P48145 328 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 PSMD4P55036 377 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 TEAD2Q15562 447 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 AVPI1Q5T686 147 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 TMPRSS9Q7Z410 1059 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ADIPOR2Q86V24 386 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 LURAP1LQ8IV03 231 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 SFXN5Q8TD22 340 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 GLYATL2Q8WU03 294 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 MICU1Q9BPX6 476 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 FAM83CQ9BQN1 747 aa10.59□□□□□ -0.71
HMGCS1-202ENST00000433297 ZMAT3Q9HA38 289 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms