RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 FOXG1P55316 489 aaPredicted RBP7.18□□□□□ -1.26
CDH13-203ENST00000431540 SPOCK1Q08629 439 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 CEACAM7Q14002 265 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 LARS2Q15031 903 aaKnown RBP7.18□□□□□ -1.26
CDH13-203ENST00000431540 GPAT3Q53EU6 434 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 RNF220Q5VTB9 566 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 ARIH2OSQ8N7S6 290 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 TMEM99Q8N816 258 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 ADPRHL1Q8NDY3 354 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 OR4A15Q8NGL6 344 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 OR5AK3PQ8NH89 298 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 TCP10LQ8TDR4 215 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 FAM216AQ8WUB2 273 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 UBLCP1Q8WVY7 318 aaPredicted RBP7.18□□□□□ -1.26
CDH13-203ENST00000431540 OXGR1Q96P68 337 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 TMEM109Q9BVC6 243 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 C1QTNF6Q9BXI9 259 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 OR11A1Q9GZK7 315 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 BPESC1Q9GZL8 116 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 SLC38A1Q9H2H9 487 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 ZNF385DQ9H6B1 395 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 SSU72Q9NP77 194 aaKnown RBP7.18□□□□□ -1.26
CDH13-203ENST00000431540 USP22Q9UPT9 525 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 RAP2CQ9Y3L5 183 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 TENM1Q9UKZ4 2725 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 ANK2Q01484 3957 aa7.18□□□□□ -1.26
CDH13-203ENST00000431540 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 A0A0G2JPF8 293 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 A0A1W2PR80 420 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 TMEM129A0AVI4 362 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 TMEM89A2RUT3 159 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 HNRNPCL2B2RXH8 293 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 HNRNPCL3B7ZW38 293 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 SYNGR3O43761 229 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 HNRNPCL1O60812 293 aaKnown RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 IL6P05231 212 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 GSNP06396 782 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 HNRNPCL4P0DMR1 293 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 ZNF43P17038 809 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 LBPP18428 481 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 ACHEP22303 614 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 NR4A1P22736 598 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 GATA3P23771 443 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 ARRB2P32121 409 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 S100A3P33764 101 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 GLRXP35754 106 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 CHI3L1P36222 383 aaPredicted RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 SRP14P37108 136 aaKnown RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 ACAA2P42765 397 aaKnown RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 ETV4P43268 484 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 RPL14P50914 215 aaKnown RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 RPS23P62266 143 aaKnown RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 SLC25A3Q00325 362 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 RUNX1T1Q06455 604 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 C6orf89Q6UWU4 347 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 C12orf54Q6X4T0 127 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 MSANTD1Q6ZTZ1 278 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 SPATA19Q7Z5L4 167 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 DPPA2Q7Z7J5 298 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 GLCCI1Q86VQ1 547 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 NUDCD3Q8IVD9 361 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 C1orf174Q8IYL3 243 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 CLECL1Q8IZS7 167 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 C4orf33Q8N1A6 199 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 LSMEM1Q8N8F7 131 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 PIK3C3Q8NEB9 887 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 ZNF418Q8TF45 676 aaPredicted RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 CNOT9Q92600 299 aaKnown RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 ZNF385AQ96PM9 386 aaKnown RBP7.17□□□□□ -1.26
CDH13-203ENST00000431540 SLC35A5Q9BS91 424 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 C1orf50Q9BV19 199 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 RACGAP1Q9H0H5 632 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 AKTIPQ9H8T0 292 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 CHODLQ9H9P2 273 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 GPR160Q9UJ42 338 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 GRIP1Q9Y3R0 1128 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 CMAHPQ9Y471 501 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 DSPPQ9NZW4 1301 aa7.17□□□□□ -1.26
CDH13-203ENST00000431540 SVEP1Q4LDE5 3571 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 TRAV20A0A0B4J274 112 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 CENPVL1A0A0U1RR11 272 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 SLC22A23A1A5C7 686 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 PRAMEF27A3QJZ7 478 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 TMEM247A6NEH6 219 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 CCDC154A6NI56 674 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 ZNF99A8MXY4 864 aaPredicted RBP7.16□□□□□ -1.26
CDH13-203ENST00000431540 TMEM233B4DJY2 109 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 FTCDNL1E5RQL4 147 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 E9PBE3 544 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 TRIM77I1YAP6 450 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 J3QLI3 93 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 TM9SF1O15321 606 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 TYROBPO43914 113 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 SLC43A1O75387 559 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 AKR7A3O95154 331 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 SHBGP04278 402 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 CECR9P0C854 216 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 NR2F1P10589 423 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 CFPP27918 469 aa7.16□□□□□ -1.26
CDH13-203ENST00000431540 CRISP3P54108 245 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms