RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 ANKRD16Q6P6B7 361 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 MYPOPQ86VE0 399 aaPredicted RBP12.09□□□□□ -0.47
SEC13-211ENST00000431352 MAL2Q969L2 176 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 MSI2Q96DH6 328 aaKnown RBP12.09□□□□□ -0.47
SEC13-211ENST00000431352 ITCHQ96J02 903 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 BPESC1Q9GZL8 116 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 NELFAQ9H3P2 528 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 PIF1Q9H611 641 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 ARMC7Q9H6L4 198 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 RMND5AQ9H871 391 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 THAP1Q9NVV9 213 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 ZNF232Q9UNY5 417 aa12.09□□□□□ -0.47
SEC13-211ENST00000431352 MALRD1Q5VYJ5 2156 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.482e-7■□□□□ 11.3
SEC13-211ENST00000431352 A0A096LPI6 279 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 ARPC4-TTLL3A0A0A6YYG9 625 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 LOC390937A0A1W2PQ73 354 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 B9A039 149 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 NDUFS8O00217 210 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 NPIPB7O75200 414 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
SEC13-211ENST00000431352 CBLP22681 906 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 ARF1P84077 181 aaKnown RBP12.08□□□□□ -0.48
SEC13-211ENST00000431352 C1DQ13901 141 aaKnown RBP12.08□□□□□ -0.48
SEC13-211ENST00000431352 TNFAIP8L3Q5GJ75 292 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 C1QTNF12Q5T7M4 302 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 MAVSQ7Z434 540 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 SVOPLQ8N434 492 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 KTI12Q96EK9 354 aaPredicted RBP12.08□□□□□ -0.48
SEC13-211ENST00000431352 PTDSS2Q9BVG9 487 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 RPS6KB2Q9UBS0 482 aa12.08□□□□□ -0.48
SEC13-211ENST00000431352 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.48
SEC13-211ENST00000431352 A0A0G2JPF8 293 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 LRP5LA4QPB2 252 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 HNRNPCL2B2RXH8 293 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 HNRNPCL3B7ZW38 293 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 C5orf58C9J3I9 102 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 FTCDNL1E5RQL4 147 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 hCG_2039718K7EN88 272 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 M0R082 166 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 HNRNPCL1O60812 293 aaKnown RBP12.07□□□□□ -0.48
SEC13-211ENST00000431352 SLC43A1O75387 559 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 TGFAP01135 160 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 ZCCHC18P0CG32 403 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 HNRNPCL4P0DMR1 293 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 ZNF43P17038 809 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 HNF1AP20823 631 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 POLR2JP52435 117 aaKnown RBP12.07□□□□□ -0.48
SEC13-211ENST00000431352 SH3BGRP55822 239 aaPredicted RBP12.07□□□□□ -0.48
SEC13-211ENST00000431352 ZSWIM7Q19AV6 140 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 CEACAM16Q2WEN9 425 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 CARD17Q5XLA6 110 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 SLC2A7Q6PXP3 512 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 SPATA21Q7Z572 469 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 GPR137CQ8N3F9 429 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 MFSD8Q8NHS3 518 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 ZNF417Q8TAU3 575 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 RNF217Q8TC41 542 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 STK35Q8TDR2 534 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 OR52B2Q96RD2 323 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 ZNF587Q96SQ5 575 aaPredicted RBP12.07□□□□□ -0.48
SEC13-211ENST00000431352 C19orf24Q9BVV8 132 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 DYNLRB1Q9NP97 96 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 MYOZ1Q9NP98 299 aaPredicted RBP12.07□□□□□ -0.48
SEC13-211ENST00000431352 ZIM2Q9NZV7 527 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 RCE1Q9Y256 329 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 IFT52Q9Y366 437 aa12.07□□□□□ -0.48
SEC13-211ENST00000431352 SH3PXD2BA1X283 911 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 ZNF503-AS2A6NEH8 195 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 UBDO15205 165 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 IGLV1-44P01699 117 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 DAOP14920 347 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 THBS4P35443 961 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 PPOXP50336 477 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 HGFACQ04756 655 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 EGR4Q05215 589 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 EFNB3Q15768 340 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 MDP1Q86V88 176 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 ZCCHC24Q8N2G6 241 aaKnown RBP12.06□□□□□ -0.48
SEC13-211ENST00000431352 MIER2Q8N344 545 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 OR4F15Q8NGB8 312 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 MAGEE2Q8TD90 523 aaPredicted RBP12.06□□□□□ -0.48
SEC13-211ENST00000431352 ZNF837Q96EG3 531 aaPredicted RBP12.06□□□□□ -0.48
SEC13-211ENST00000431352 BOD1Q96IK1 185 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 SOX7Q9BT81 388 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 LINC00470Q9BZP3 86 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 PLK3Q9H4B4 646 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 CRLF2Q9HC73 371 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 GPR35Q9HC97 309 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 A4GALTQ9NPC4 353 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 SDR39U1Q9NRG7 319 aaPredicted RBP12.06□□□□□ -0.48
SEC13-211ENST00000431352 B3GAT1Q9P2W7 334 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 CRNNQ9UBG3 495 aaPredicted RBP12.06□□□□□ -0.48
SEC13-211ENST00000431352 PCDHB14Q9Y5E9 798 aa12.06□□□□□ -0.48
SEC13-211ENST00000431352 IGHV2OR16-5A0A0B4J2B6 119 aa12.05□□□□□ -0.48
SEC13-211ENST00000431352 A0A1B0GWA3 101 aa12.05□□□□□ -0.48
SEC13-211ENST00000431352 SLCO1B7G3V0H7 640 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms