RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 RNPS1Q15287 305 aaKnown RBP14.99□□□□□ -0.01
UBE3D-204ENST00000430071 GTF2IRD2BQ6EKJ0 949 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 TMPPEQ6ZT21 453 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 GTF2IRD2Q86UP8 949 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 S100PBPQ96BU1 408 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 SLC47A1Q96FL8 570 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 DLL4Q9NR61 685 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 SLC7A7Q9UM01 511 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 A4GNTQ9UNA3 340 aa14.99□□□□□ -0.01
UBE3D-204ENST00000430071 A0A087WUJ7 227 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 ELOA3DA6NLF2 546 aaPredicted RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 FFAR1O14842 300 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 CYTIPO60759 359 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 NPIPB7O75200 414 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 ADAP00813 363 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 PNMTP11086 282 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 PSMB1P20618 241 aaKnown RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 PTNP21246 168 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 MAP2K6P52564 334 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 VLDLRP98155 873 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 EGR4Q05215 589 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 ELOA3BQ3SY89 546 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 IQCCQ4KMZ1 466 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 MTX3Q5HYI7 312 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 SWT1Q5T5J6 900 aaKnown RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 WDR88Q6ZMY6 472 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 P3H2Q8IVL5 708 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 ELOA3Q8NG57 546 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 RNF217Q8TC41 542 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 UTP4Q969X6 686 aaKnown RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 SLC41A3Q96GZ6 507 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 BCO1Q9HAY6 547 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 NDUFAF4Q9P032 175 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 RIMS3Q9UJD0 308 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 ENPP4Q9Y6X5 453 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 A8MVM7 634 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 hCG_2039718K7EN88 272 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 SULT2B1O00204 365 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 CHP2O43745 196 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 PRSS23O95084 383 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 OR5F1O95221 314 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 FKBP2P26885 142 aaKnown RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 CLK1P49759 484 aaKnown RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 TAS2R41P59536 307 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 FLOT2Q14254 428 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 ACKR1Q16570 336 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 LINC00114Q6XXX2 140 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 STK32CQ86UX6 486 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 CCDC103Q8IW40 242 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 SLC43A2Q8N370 569 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 DDIT4LQ96D03 193 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 PLPPR2Q96GM1 343 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 PRRC1Q96M27 445 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 SMR3AQ99954 134 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 PRSS27Q9BQR3 290 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 POLR2J2Q9GZM3 115 aaKnown RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 POLR2J3Q9H1A7 115 aaKnown RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 MMADHCQ9H3L0 296 aaPredicted RBP14.98□□□□□ -0.01
UBE3D-204ENST00000430071 SELENONQ9NZV5 590 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 RHCGQ9UBD6 479 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 EDARQ9UNE0 448 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 GPR52Q9Y2T5 361 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 HDGFL3Q9Y3E1 203 aa14.98□□□□□ -0.01
UBE3D-204ENST00000430071 ZNF716A6NP11 495 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 IMPDH2P12268 514 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 OR3A2P47893 321 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 FOXG1P55316 489 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-204ENST00000430071 NKX6-1P78426 367 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-204ENST00000430071 TAB1Q15750 504 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 SFRP5Q5T4F7 317 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 C1orf140Q5VVS0 124 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 ABLIM2Q6H8Q1 611 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 SEZ6L2Q6UXD5 910 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 LILRB1Q8NHL6 650 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-204ENST00000430071 STK35Q8TDR2 534 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 NEUROG1Q92886 237 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 KTI12Q96EK9 354 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-204ENST00000430071 LRGUKQ96M69 825 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 SEPHS2Q99611 448 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 POTEKPQ9BYX7 375 aa14.97□□□□□ -0.01
UBE3D-204ENST00000430071 BEX4Q9NWD9 120 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-204ENST00000430071 NSD1Q96L73 2696 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-204ENST00000430071 ABCA2Q9BZC7 2435 aa14.96□□□□□ -0.01
UBE3D-204ENST00000430071 CR1P17927 2039 aa14.96□□□□□ -0.01
UBE3D-204ENST00000430071 LYZL6O75951 148 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 DIRAS1O95057 198 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 IGHV3-9P01782 118 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 BEX5Q5H9J7 111 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 YTHDF3Q7Z739 585 aaKnown RBP14.96□□□□□ -0.02
UBE3D-204ENST00000430071 NKAIN4Q8IVV8 208 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 ADGRG5Q8IZF4 528 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 OFCC1Q8IZS5 231 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 ZNF426Q9BUY5 554 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 PTDSS2Q9BVG9 487 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 TRIM15Q9C019 465 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 GP6Q9HCN6 339 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 MAN2C1Q9NTJ4 1040 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 KLHL9Q9P2J3 617 aa14.96□□□□□ -0.02
UBE3D-204ENST00000430071 FN1P02751 2386 aaKnown RBP14.95□□□□□ -0.02
UBE3D-204ENST00000430071 AQP12BA6NM10 295 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms