RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 PRSS38A1L453 326 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 ELOA3DA6NLF2 546 aaPredicted RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 GTF2F2P13984 249 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 RPL35P42766 123 aaKnown RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 DUSP8Q13202 625 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 ELOA3BQ3SY89 546 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 FAM109BQ6ICB4 259 aaPredicted RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 BPHLQ86WA6 291 aaPredicted RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 ELOA3Q8NG57 546 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 PHOSPHO1Q8TCT1 267 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 DUSP19Q8WTR2 217 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 GAL3ST3Q96A11 431 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 SMIM19Q96E16 107 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 PTDSS2Q9BVG9 487 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 NRSN2Q9GZP1 204 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 NRIP3Q9NQ35 241 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 KLHL9Q9P2J3 617 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 PHF11Q9UIL8 331 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 SPACA6W5XKT8 324 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 MPDZO75970 2070 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 COL4A3Q01955 1670 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 MEIKINA0A087WXM9 373 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 CCSO14618 274 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 CELA2BP08218 269 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 UGT2B7P16662 529 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 SORDQ00796 357 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 LIPNQ5VXI9 398 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 GPR139Q6DWJ6 353 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 LIX1LQ8IVB5 337 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 STPG2Q8N412 459 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 ASB16Q96NS5 453 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 OR2M4Q96R27 311 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 GAL3ST4Q96RP7 486 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 MKKSQ9NPJ1 570 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 ST6GALNAC2Q9UJ37 374 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 FBXO9Q9UK97 447 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 V9GY05 133 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 MAP1BP46821 2468 aaKnown RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 C7orf66A4D0T2 115 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 DCTN6O00399 190 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 TIMP1P01033 207 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 VEGFBP49765 207 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 CTXN1P60606 82 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 COL28A1Q2UY09 1125 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 JAZF1Q86VZ6 243 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 PLPP7Q8NBV4 271 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 NSMAFQ92636 917 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 ATOH1Q92858 354 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 TRAF4Q9BUZ4 470 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 TEX101Q9BY14 249 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 SDHAF2Q9NX18 166 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 CAMK2AQ9UQM7 478 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 M0QYG6 137 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 CREBL2O60519 120 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 NDUFB2O95178 105 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 IGF2P01344 180 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 IGKV1D-16P01601 117 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 MAOAP21397 527 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 CCKBRP32239 447 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 LSSP48449 732 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 EFNB2P52799 333 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 KLF9Q13886 244 aaPredicted RBP11.43□□□□□ -0.58
CDH3-202ENST00000429102 CBFBQ13951 182 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 SLC22A10Q63ZE4 541 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 ARSKQ6UWY0 536 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 TPRA1Q86W33 373 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 ANGPTL6Q8NI99 470 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 ASB12Q8WXK4 309 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 WNT2BQ93097 391 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 SGTBQ96EQ0 304 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 ARPC5LQ9BPX5 153 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 OR5V1Q9UGF6 321 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 KLHDC2Q9Y2U9 406 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 RWDD3Q9Y3V2 267 aa11.43□□□□□ -0.58
CDH3-202ENST00000429102 LRRK1Q38SD2 2015 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 HEATR5AQ86XA9 2040 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 DCDC2BA2VCK2 349 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ZNF879B4DU55 563 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 J3QRE1 110 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 CTNSO60931 367 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 SULT1A3P0DMM9 295 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 SULT1A4P0DMN0 295 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 MMP15P51511 669 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 FOXL2P58012 376 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ENPP2Q13822 863 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 GAB4Q2WGN9 574 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 OR2L13Q8N349 312 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 CSNK1A1LQ8N752 337 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 CDRT4Q8N9R6 151 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 OR51S1Q8NGJ8 323 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ZNF563Q8TA94 476 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 TMEM106AQ96A25 262 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ALG12Q9BV10 488 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 LYARQ9NX58 379 aaKnown RBP11.42□□□□□ -0.58
CDH3-202ENST00000429102 ACTR10Q9NZ32 417 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ERVK-19Q9WJR5 959 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 FAM186AA6NE01 2351 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms