RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PAGE3Q5JUK9 113 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 BEND6Q5SZJ8 279 aaPredicted RBP13.5□□□□□ -0.25
SEC13-210ENST00000428626 ANKRD16Q6P6B7 361 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 KLHL24Q6TFL4 600 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 C6orf89Q6UWU4 347 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 WDFY1Q8IWB7 410 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 TAAR8Q969N4 342 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 EBF4Q9BQW3 602 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 IKZF5Q9H5V7 419 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 NKIRAS1Q9NYS0 192 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 CRNNQ9UBG3 495 aaPredicted RBP13.5□□□□□ -0.25
SEC13-210ENST00000428626 PRDM4Q9UKN5 801 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 RASD1Q9Y272 281 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 IFT52Q9Y366 437 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 A0A096LPI6 279 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 TRBV5-3A0A0A0MS03 114 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 ARPC4-TTLL3A0A0A6YYG9 625 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 A0A1B0GWA3 101 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 KRT33AO76009 404 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 IGLV1-44P01699 117 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 ARAFP10398 606 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 ZNF16P17020 682 aaPredicted RBP13.49□□□□□ -0.25
SEC13-210ENST00000428626 MRPL19P49406 292 aaKnown RBP13.49□□□□□ -0.25
SEC13-210ENST00000428626 ROR2Q01974 943 aaKnown RBP13.49□□□□□ -0.25
SEC13-210ENST00000428626 NAAAQ02083 359 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 HGFACQ04756 655 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 CHRNB3Q05901 458 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 ADIPOQQ15848 244 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 CHRFAM7AQ494W8 412 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 PHYHD1Q5SRE7 291 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 LRIF1Q5T3J3 769 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 C1QTNF12Q5T7M4 302 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 PHC2Q8IXK0 858 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 ARIH2OSQ8N7S6 290 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 ANKS4BQ8N8V4 417 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 NFKBIDQ8NI38 313 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 BBS10Q8TAM1 723 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 SLCO1B3Q9NPD5 702 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 OBP2BQ9NPH6 170 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 CA10Q9NS85 328 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 THUMPD1Q9NXG2 353 aaKnown RBP13.49□□□□□ -0.25
SEC13-210ENST00000428626 VAPAQ9P0L0 249 aa13.49□□□□□ -0.25
SEC13-210ENST00000428626 M0R082 166 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 TPST2O60704 377 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 HPRP00739 348 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 CBLP22681 906 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 IDH3AP50213 366 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 ARF1P84077 181 aaKnown RBP13.48□□□□□ -0.25
SEC13-210ENST00000428626 FADDQ13158 208 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 BLOC1S3Q6QNY0 202 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 ABHD12BQ7Z5M8 362 aaPredicted RBP13.48□□□□□ -0.25
SEC13-210ENST00000428626 ZNF417Q8TAU3 575 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 MAGEE2Q8TD90 523 aaPredicted RBP13.48□□□□□ -0.25
SEC13-210ENST00000428626 SLC35B4Q969S0 331 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 ZNF587Q96SQ5 575 aaPredicted RBP13.48□□□□□ -0.25
SEC13-210ENST00000428626 KATNB1Q9BVA0 655 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 PMF1-BGLAPU3KQ54 211 aa13.48□□□□□ -0.25
SEC13-210ENST00000428626 SLC35F4A4IF30 521 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 TMEM247A6NEH6 219 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 RNF212BA8MTL3 300 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 RPL36A-HNRNPH2H7BZ11 118 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 TRAF3IP2O43734 574 aaPredicted RBP13.47□□□□□ -0.25
SEC13-210ENST00000428626 SEC14L2O76054 403 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 IGKV3-15P01624 115 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 IGFBP1P08833 259 aaPredicted RBP13.47□□□□□ -0.25
SEC13-210ENST00000428626 HLA-DOBP13765 273 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 ETS2P15036 469 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 USF1P22415 310 aaPredicted RBP13.47□□□□□ -0.25
SEC13-210ENST00000428626 GRPRP30550 384 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 PRKAR1BP31321 381 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 SERPINF1P36955 418 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 UBE2NP61088 152 aaKnown RBP13.47□□□□□ -0.25
SEC13-210ENST00000428626 ADRM1Q16186 407 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 PODNL1Q6PEZ8 512 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 DHRS4L2Q6PKH6 230 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 VHLLQ6RSH7 139 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 NHLRC1Q6VVB1 395 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 TMEM123Q8N131 208 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 PROX1Q92786 737 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 C7orf26Q96N11 449 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 OXGR1Q96P68 337 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 OR2M2Q96R28 347 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 ARMC7Q9H6L4 198 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 TCF7L2Q9NQB0 619 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 CCDC167Q9P0B6 97 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 KLHL14Q9P2G3 628 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 RCE1Q9Y256 329 aa13.47□□□□□ -0.25
SEC13-210ENST00000428626 IGHV4-61A0A0C4DH41 118 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 OR6C65A6NJZ3 312 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 MS4A18H0YCH9 400 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 CRYAAP02489 173 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 OR4A8P0C604 315 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 FAM157CP0CG43 387 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 ZNF43P17038 809 aa13.46□□□□□ -0.25
SEC13-210ENST00000428626 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEC13-210ENST00000428626 CEACAM16Q2WEN9 425 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms