RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 DNAJA4Q8WW22 397 aaPredicted RBP23.77■■□□□ 1.4
LMO1-202ENST00000428101 HTRA1Q92743 480 aa23.77■■□□□ 1.4
LMO1-202ENST00000428101 BCL2L2Q92843 193 aaPredicted RBP23.77■■□□□ 1.4
LMO1-202ENST00000428101 WFDC6Q9BQY6 131 aa23.77■■□□□ 1.4
LMO1-202ENST00000428101 SPATA5L1Q9BVQ7 753 aa23.77■■□□□ 1.4
LMO1-202ENST00000428101 MOKQ9UQ07 419 aa23.77■■□□□ 1.4
LMO1-202ENST00000428101 YLPM1P49750 1951 aaKnown RBP23.76■■□□□ 1.39
LMO1-202ENST00000428101 IGHV4-30-2A0A087WSY4 118 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 ZNF43P17038 809 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 SLC6A2P23975 617 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 APOBEC3AP31941 199 aaPredicted RBP23.76■■□□□ 1.39
LMO1-202ENST00000428101 NUDT6P53370 316 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 CLDN17P56750 224 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 ALG10BQ5I7T1 473 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 FAM69AQ5T7M9 428 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 OXGR1Q96P68 337 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 CPPED1Q9BRF8 314 aaPredicted RBP23.76■■□□□ 1.39
LMO1-202ENST00000428101 NELFAQ9H3P2 528 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 INTS9Q9NV88 658 aaKnown RBP23.76■■□□□ 1.39
LMO1-202ENST00000428101 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.76■■□□□ 1.39
LMO1-202ENST00000428101 ADAM21Q9UKJ8 722 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 CORO2BQ9UQ03 480 aa23.76■■□□□ 1.39
LMO1-202ENST00000428101 IGHV1-18A0A0C4DH31 117 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 H7C417 338 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 M0R082 166 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 OR2T1O43869 369 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 TPST2O60704 377 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 GTF2E2P29084 291 aaKnown RBP23.75■■□□□ 1.39
LMO1-202ENST00000428101 RAB35Q15286 201 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 RUNDC3AQ59EK9 446 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 C5orf46Q6UWT4 87 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 ZNF417Q8TAU3 575 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 SLC38A4Q969I6 547 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 ZNF587Q96SQ5 575 aaPredicted RBP23.75■■□□□ 1.39
LMO1-202ENST00000428101 RHNO1Q9BSD3 238 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 RCE1Q9Y256 329 aa23.75■■□□□ 1.39
LMO1-202ENST00000428101 A0A096LNT2 108 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 ARPC4-TTLL3A0A0A6YYG9 625 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 EVPLLA8MZ36 301 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 AIM2O14862 343 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 CRLF1O75462 422 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 AQP1P29972 269 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 GRPRP30550 384 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 ROR2Q01974 943 aaKnown RBP23.74■■□□□ 1.39
LMO1-202ENST00000428101 FAM91A1Q658Y4 838 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 ULK3Q6PHR2 472 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 MAGEE2Q8TD90 523 aaPredicted RBP23.74■■□□□ 1.39
LMO1-202ENST00000428101 CKAP2Q8WWK9 683 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 STON2Q8WXE9 905 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 THOC1Q96FV9 657 aaKnown RBP23.74■■□□□ 1.39
LMO1-202ENST00000428101 SLC38A2Q96QD8 506 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 ZNF607Q96SK3 696 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 KLHL14Q9P2G3 628 aa23.74■■□□□ 1.39
LMO1-202ENST00000428101 TESQ9UGI8 421 aaKnown RBP23.74■■□□□ 1.39
LMO1-202ENST00000428101 TRAV36DV7A0A075B6V5 113 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 A0A087WUJ7 227 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 A0A096LPE4 126 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 A0A1W2PPZ6 126 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 RPL36A-HNRNPH2H7BZ11 118 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 CBLP22681 906 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 OR1Q1Q15612 314 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 MST1LQ2TV78 715 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 HMBOX1Q6NT76 420 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 ANKRD16Q6P6B7 361 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 H1FNTQ75WM6 255 aaPredicted RBP23.73■■□□□ 1.39
LMO1-202ENST00000428101 NET1Q7Z628 596 aaPredicted RBP23.73■■□□□ 1.39
LMO1-202ENST00000428101 HIPK4Q8NE63 616 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 ZNF317Q96PQ6 595 aaPredicted RBP23.73■■□□□ 1.39
LMO1-202ENST00000428101 RABEP2Q9H5N1 569 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 ZNF385DQ9H6B1 395 aa23.73■■□□□ 1.39
LMO1-202ENST00000428101 CRNNQ9UBG3 495 aaPredicted RBP23.73■■□□□ 1.39
LMO1-202ENST00000428101 A0A0B4J2E0 115 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 LOC102725191A0A1B0GVB3 256 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 A0A1B0GX12 115 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 PRORSD1PA6NEY8 169 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 HMGB1P1B2RPK0 211 aaPredicted RBP23.72■■□□□ 1.39
LMO1-202ENST00000428101 CD5LO43866 347 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 MFN2O95140 757 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 UBE2NP61088 152 aaKnown RBP23.72■■□□□ 1.39
LMO1-202ENST00000428101 TUBA1BP68363 451 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 TUBA4AP68366 448 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 SWI5Q1ZZU3 235 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 TUBA1AQ71U36 451 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 PTOV1Q86YD1 416 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 ARMC8Q8IUR7 673 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 BHLHE22Q8NFJ8 381 aaPredicted RBP23.72■■□□□ 1.39
LMO1-202ENST00000428101 SLC47A1Q96FL8 570 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 MAGEB18Q96M61 343 aa23.72■■□□□ 1.39
LMO1-202ENST00000428101 LEF1Q9UJU2 399 aaPredicted RBP23.72■■□□□ 1.39
LMO1-202ENST00000428101 MS4A18H0YCH9 400 aa23.71■■□□□ 1.39
LMO1-202ENST00000428101 SLC43A1O75387 559 aa23.71■■□□□ 1.39
LMO1-202ENST00000428101 SERPINB7O75635 380 aa23.71■■□□□ 1.39
LMO1-202ENST00000428101 TP53P04637 393 aaPredicted RBP23.71■■□□□ 1.39
LMO1-202ENST00000428101 PAX7P23759 505 aa23.71■■□□□ 1.39
LMO1-202ENST00000428101 SH3BGRP55822 239 aaPredicted RBP23.71■■□□□ 1.39
LMO1-202ENST00000428101 RGS8P57771 180 aaPredicted RBP23.71■■□□□ 1.39
LMO1-202ENST00000428101 DSCR9P59020 149 aa23.71■■□□□ 1.39
LMO1-202ENST00000428101 CHRNB3Q05901 458 aa23.71■■□□□ 1.39
LMO1-202ENST00000428101 C1DQ13901 141 aaKnown RBP23.71■■□□□ 1.39
LMO1-202ENST00000428101 MS4A18Q3C1V0 323 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms