RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SELENOPP49908 381 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 GZMMP51124 257 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 PSMA6P60900 246 aaKnown RBP8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 IL1RL1Q01638 556 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 BSPH1Q075Z2 132 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 LGALS3BPQ08380 585 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 FOXD4Q12950 439 aaPredicted RBP8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NPTX1Q15818 432 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NRF1Q16656 503 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 VMACQ2NL98 169 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 Q5PR19 223 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NCMAPQ5T1S8 102 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 FAM69AQ5T7M9 428 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 C5orf46Q6UWT4 87 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TGIF2LYQ8IUE0 185 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 KDM8Q8N371 416 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 C10orf53Q8N6V4 93 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 PCYOX1LQ8NBM8 494 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 WFDC11Q8NEX6 87 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 OR6T1Q8NGN1 323 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ZNF417Q8TAU3 575 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NEUROG1Q92886 237 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 PIGTQ969N2 578 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TAAR8Q969N4 342 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 RCN3Q96D15 328 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SLC47A1Q96FL8 570 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 PERPQ96FX8 193 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ZNF587Q96SQ5 575 aaPredicted RBP8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 EPYCQ99645 322 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 MCHR1Q99705 422 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SH3GL1Q99961 368 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ECSITQ9BQ95 431 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TMEM204Q9BSN7 226 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 FAM107BQ9H098 131 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NPAP1Q9NZP6 1156 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 USP22Q9UPT9 525 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 RASD1Q9Y272 281 aa8.11□□□□□ -1.11
RFX3-AS1-202ENST00000427722 HEATR5AQ86XA9 2040 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 A0A087WUJ7 227 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 DPRXA6NFQ7 191 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CPSF4LA6NMK7 179 aaKnown RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 PDLIM1O00151 329 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SLC22A2O15244 555 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 FMO6PO60774 539 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 VAMP5O95183 116 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CD99P14209 185 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NQO1P15559 274 aaKnown RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ZNF43P17038 809 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 HOXB4P17483 251 aaPredicted RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ZNF83P51522 516 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CRYBA2P53672 197 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CDH11P55287 796 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CDH12P55289 794 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CLDN17P56750 224 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ADAM8P78325 824 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NKX6-1P78426 367 aaPredicted RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 C1DQ13901 141 aaKnown RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 LRRC23Q53EV4 343 aaPredicted RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NIPAL3Q6P499 406 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ZNF613Q6PF04 617 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 KLHL24Q6TFL4 600 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CREB3L2Q70SY1 520 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CALHM3Q86XJ0 350 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 KRTAP1-3Q8IUG1 177 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 RBM45Q8IUH3 476 aaKnown RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 EPHX4Q8IUS5 362 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 POMGNT2Q8NAT1 580 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 C1orf162Q8NEQ5 155 aaPredicted RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 OR4D11Q8NGI4 311 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TMEM171Q8WVE6 324 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 PROX1Q92786 737 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 PIP5K1AQ99755 562 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 GID8Q9NWU2 228 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 B3GAT1Q9P2W7 334 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SLC25A15Q9Y619 301 aa8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 HRNRQ86YZ3 2850 aaPredicted RBP8.1□□□□□ -1.11
RFX3-AS1-202ENST00000427722 FAM220BPB1ANY3 271 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ZNF587BE7ETH6 402 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 M0R1B8 84 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 KPNA4O00629 521 aaPredicted RBP8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ABCD4O14678 606 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ATP8B1O43520 1251 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CHP2O43745 196 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 OR2T1O43869 369 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 CCDC22O60826 627 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 FZD7O75084 574 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SERPINI2O75830 405 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 NPPAP01160 153 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 C8BP07358 591 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TNFRSF1BP20333 461 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 MPGP29372 298 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SLC25A3Q00325 362 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 TGFBR3Q03167 851 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 SPOCK1Q08629 439 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 GABRA6Q16445 453 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 HIKESHIQ53FT3 197 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 ENTPD8Q5MY95 495 aa8.09□□□□□ -1.11
RFX3-AS1-202ENST00000427722 OR7E24Q6IFN5 339 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms