RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 GSX2Q9BZM3 304 aa16.81■□□□□ 0.28
COL9A2-204ENST00000427563 SLC17A5Q9NRA2 495 aa16.81■□□□□ 0.28
COL9A2-204ENST00000427563 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
COL9A2-204ENST00000427563 UPB1Q9UBR1 384 aa16.81■□□□□ 0.28
COL9A2-204ENST00000427563 TRAV36DV7A0A075B6V5 113 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 LOC100653049A0A140TA62 436 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 LRRN3E7EW58 273 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 KRT34O76011 436 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 ZNF432O94892 652 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 VAMP5O95183 116 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 HPRP00739 348 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 PAX1P15863 534 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 MPGP29372 298 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 GRPRP30550 384 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 ZNF83P51522 516 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 PGGHGQ32M88 737 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 FAM69AQ5T7M9 428 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 SHEQ5VZ18 495 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 CCDC80Q76M96 950 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 OR8J3Q8NGG0 315 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 SLC41A3Q96GZ6 507 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 MOGAT1Q96PD6 335 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 MCHR1Q99705 422 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 C1QTNF6Q9BXI9 259 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 HEATR1Q9H583 2144 aaKnown RBP16.8■□□□□ 0.28
COL9A2-204ENST00000427563 TMEM27Q9HBJ8 222 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 NGBQ9NPG2 151 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 MRGBPQ9NV56 204 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 ZNF701Q9NV72 531 aaPredicted RBP16.8■□□□□ 0.28
COL9A2-204ENST00000427563 GMPR2Q9P2T1 348 aaKnown RBP16.8■□□□□ 0.28
COL9A2-204ENST00000427563 ARL2BPQ9Y2Y0 163 aa16.8■□□□□ 0.28
COL9A2-204ENST00000427563 MS4A18H0YCH9 400 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 OVOL3O00110 214 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 ABCD4O14678 606 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 TRAF3IP2O43734 574 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 FMO6PO60774 539 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 C8BP07358 591 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 NCALDP61601 193 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 CYLC2Q14093 348 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 MS4A18Q3C1V0 323 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 GKAP1Q5VSY0 366 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 NIPAL3Q6P499 406 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 PATL1Q86TB9 770 aaKnown RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 CIARTQ8N365 385 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 POU5F2Q8N7G0 328 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 POMGNT2Q8NAT1 580 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 C1orf162Q8NEQ5 155 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 VANGL1Q8TAA9 524 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 BOD1Q96IK1 185 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 ALKBH3Q96Q83 286 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 SMR3AQ99954 134 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 NELFAQ9H3P2 528 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 EVA1AQ9H8M9 152 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 LAMP3Q9UQV4 416 aa16.79■□□□□ 0.28
COL9A2-204ENST00000427563 MAGED1Q9Y5V3 778 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-204ENST00000427563 CPSF4LA6NMK7 179 aaKnown RBP16.78■□□□□ 0.28
COL9A2-204ENST00000427563 BBIP1A8MTZ0 92 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 AIM2O14862 343 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 OR2T1O43869 369 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 CCDC22O60826 627 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 CD8AP01732 235 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 HLA-DOBP13765 273 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 CLDN17P56750 224 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 HIKESHIQ53FT3 197 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 ENTPD8Q5MY95 495 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 OR7E24Q6IFN5 339 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 ZNF613Q6PF04 617 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 C5orf46Q6UWT4 87 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 B3GLCTQ6Y288 498 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
COL9A2-204ENST00000427563 RANBP3LQ86VV4 465 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-204ENST00000427563 SLC30A8Q8IWU4 369 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 OR6S1Q8NH40 331 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 TMEM171Q8WVE6 324 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 FBXW5Q969U6 566 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 OXGR1Q96P68 337 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 TMEM43Q9BTV4 400 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 SLC13A4Q9UKG4 626 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 CAPN7Q9Y6W3 813 aa16.78■□□□□ 0.28
COL9A2-204ENST00000427563 CDH2P19022 906 aaPredicted RBP16.77■□□□□ 0.28
COL9A2-204ENST00000427563 TNFRSF1BP20333 461 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 CD40P25942 277 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 MMEL1Q495T6 779 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 PHYHD1Q5SRE7 291 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 SWT1Q5T5J6 900 aaKnown RBP16.77■□□□□ 0.28
COL9A2-204ENST00000427563 PRSS57Q6UWY2 283 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 H1FNTQ75WM6 255 aaPredicted RBP16.77■□□□□ 0.28
COL9A2-204ENST00000427563 C17orf78Q8N4C9 275 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 CCDC197Q8NCU1 140 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 ADPRHL1Q8NDY3 354 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 OR1K1Q8NGR3 316 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 RNF217Q8TC41 542 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 BCAS4Q8TDM0 211 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 SMAP2Q8WU79 429 aaPredicted RBP16.77■□□□□ 0.28
COL9A2-204ENST00000427563 RCN3Q96D15 328 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 ZNF837Q96EG3 531 aaPredicted RBP16.77■□□□□ 0.28
COL9A2-204ENST00000427563 Q96MF0 132 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 LINC00470Q9BZP3 86 aa16.77■□□□□ 0.28
COL9A2-204ENST00000427563 PCDHAC1Q9H158 963 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms