RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 SELENOPP49908 381 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 SH3BGRP55822 239 aaPredicted RBP8.92□□□□□ -0.98
COMMD1-202ENST00000427417 UBE2NP61088 152 aaKnown RBP8.92□□□□□ -0.98
COMMD1-202ENST00000427417 EGR4Q05215 589 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 C1DQ13901 141 aaKnown RBP8.92□□□□□ -0.98
COMMD1-202ENST00000427417 NFYCQ13952 458 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 ADRM1Q16186 407 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
COMMD1-202ENST00000427417 HMBOX1Q6NT76 420 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 ZNF544Q6NX49 715 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 H1FNTQ75WM6 255 aaPredicted RBP8.92□□□□□ -0.98
COMMD1-202ENST00000427417 EPHX4Q8IUS5 362 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 C10orf111Q8N326 155 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 MUC15Q8N387 334 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 OR6S1Q8NH40 331 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 THOC1Q96FV9 657 aaKnown RBP8.92□□□□□ -0.98
COMMD1-202ENST00000427417 OXGR1Q96P68 337 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 CGREF1Q99674 301 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 LINC00470Q9BZP3 86 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 IKZF5Q9H5V7 419 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 ZNF385DQ9H6B1 395 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 CBLN4Q9NTU7 201 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 CORINQ9Y5Q5 1042 aa8.92□□□□□ -0.98
COMMD1-202ENST00000427417 A0A087WUJ7 227 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 LOC102725191A0A1B0GVB3 256 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 E7EQL1 145 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 M0R082 166 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 TPST1O60507 370 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 FMO6PO60774 539 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 FZD7O75084 574 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 SLC43A1O75387 559 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 MFN2O95140 757 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 CD8AP01732 235 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 C8BP07358 591 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 TROVE2P10155 538 aaKnown RBP eCLIP8.91□□□□□ -0.98
COMMD1-202ENST00000427417 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
COMMD1-202ENST00000427417 NQO1P15559 274 aaKnown RBP8.91□□□□□ -0.98
COMMD1-202ENST00000427417 FABP6P51161 128 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 CLDN17P56750 224 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 MTPNP58546 118 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 PPP2R2BQ00005 443 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 IL1RL1Q01638 556 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 TNK1Q13470 666 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 OR1Q1Q15612 314 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 GLIPR1L2Q4G1C9 344 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 INTS11Q5TA45 600 aaKnown RBP8.91□□□□□ -0.98
COMMD1-202ENST00000427417 ADPRHL1Q8NDY3 354 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 PIK3C3Q8NEB9 887 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 OR1K1Q8NGR3 316 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 ZNF417Q8TAU3 575 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 MAGEE2Q8TD90 523 aaPredicted RBP8.91□□□□□ -0.98
COMMD1-202ENST00000427417 RASSF5Q8WWW0 418 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 TAAR8Q969N4 342 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 ALKBH3Q96Q83 286 aaPredicted RBP8.91□□□□□ -0.98
COMMD1-202ENST00000427417 ZNF587Q96SQ5 575 aaPredicted RBP8.91□□□□□ -0.98
COMMD1-202ENST00000427417 SH3GL1Q99961 368 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 KCNS3Q9BQ31 491 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 C1QTNF6Q9BXI9 259 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 ASPNQ9BXN1 380 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 ATP23Q9Y6H3 246 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 TLN2Q9Y4G6 2542 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 ABCA2Q9BZC7 2435 aa8.91□□□□□ -0.98
COMMD1-202ENST00000427417 IGKV1D-42A0A075B6H8 117 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 A0A0B4J2E0 115 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 A0A1B0GX12 115 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 RPL36A-HNRNPH2H7BZ11 118 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 LGI1O95970 557 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 IGHV4-39P01824 125 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 PTNP21246 168 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 PCSK6P29122 969 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 GRPRP30550 384 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 APOBEC3AP31941 199 aaPredicted RBP8.9□□□□□ -0.98
COMMD1-202ENST00000427417 NUDT6P53370 316 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 PCBP3P57721 371 aaKnown RBP8.9□□□□□ -0.98
COMMD1-202ENST00000427417 ROR2Q01974 943 aaKnown RBP8.9□□□□□ -0.98
COMMD1-202ENST00000427417 CHRNB3Q05901 458 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 DMTNQ08495 405 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 SPOCK1Q08629 439 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 CYLC2Q14093 348 aaPredicted RBP8.9□□□□□ -0.98
COMMD1-202ENST00000427417 RAB35Q15286 201 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 C3orf36Q3SXR2 165 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 TBRG1Q3YBR2 411 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 HIKESHIQ53FT3 197 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 ANKRD16Q6P6B7 361 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 ZNF613Q6PF04 617 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 PATL1Q86TB9 770 aaKnown RBP8.9□□□□□ -0.98
COMMD1-202ENST00000427417 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 COMTD1Q86VU5 262 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 PTOV1Q86YD1 416 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 UEVLDQ8IX04 471 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 KDM8Q8N371 416 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 GPR137CQ8N3F9 429 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 SCAIQ8N9R8 606 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 SMYD1Q8NB12 490 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 MAPK1IP1LQ8NDC0 245 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 SLC26A7Q8TE54 656 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 MCHR1Q99705 422 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 TMEM43Q9BTV4 400 aa8.9□□□□□ -0.98
COMMD1-202ENST00000427417 CACNG6Q9BXT2 260 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms