RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 PAAF1Q9BRP4 392 aa11.69□□□□□ -0.54
HDLBP-214ENST00000427183 STEAP1Q9UHE8 339 aa11.69□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF443Q9Y2A4 671 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF337Q9Y3M9 751 aa11.69□□□□□ -0.54
HDLBP-214ENST00000427183 RNF212BA8MTL3 300 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 GABARAPH6UMI1 98 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 GABARAPO95166 117 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SDC1P18827 310 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 CCR6P51684 374 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 NR0B2Q15466 257 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SLC36A2Q495M3 483 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 MARCH8Q5T0T0 291 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 OR13C2Q8NGS9 318 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 YIPF5Q969M3 257 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 RAB3CQ96E17 227 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SLC12A9Q9BXP2 914 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 COL5A3P25940 1745 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 MCRIP1C9JLW8 97 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 GPR39O43194 453 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SEMA4FO95754 770 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 PNPP00491 289 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SERTAD2Q14140 314 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 HES1Q14469 280 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 PGGHGQ32M88 737 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 PHLDA2Q53GA4 152 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 TMEM31Q5JXX7 168 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 CPZQ66K79 652 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 TMEM25Q86YD3 366 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 NT5DC2Q9H857 520 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 PELI2Q9HAT8 420 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF281Q9Y2X9 895 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 IMPA1P29218 277 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 HOXD13P35453 343 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 HBG1P69891 147 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 HBG2P69892 147 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 C9orf152Q5JTZ5 239 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 WDTC1Q8N5D0 677 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 LGALS14Q8TCE9 139 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 TFAP2CQ92754 450 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 UBL7Q96S82 380 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 NOX4Q9NPH5 578 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 RNASET2O00584 256 aaKnown RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 TIMM8AO60220 97 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 BLVRBP30043 206 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 PXNP49023 591 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 CLDN2P57739 230 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SLC35F3Q8IY50 421 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 GCNT2Q8N0V5 402 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 ACOT4Q8N9L9 421 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 OR7D2Q96RA2 312 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SLC6A20Q9NP91 592 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF593O00488 134 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
HDLBP-214ENST00000427183 ICMTO60725 284 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF92Q03936 586 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF425Q6IV72 752 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 SYT9Q86SS6 491 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 ADGRG5Q8IZF4 528 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 RNF141Q8WVD5 230 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 GSTO2Q9H4Y5 243 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 NENFQ9UMX5 172 aa11.68□□□□□ -0.54
HDLBP-214ENST00000427183 B3GALNT1O75752 331 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 HLA-HP01893 362 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 CPOXP36551 454 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 MMP12P39900 470 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 RPL13AP40429 203 aaKnown RBP11.67□□□□□ -0.54
HDLBP-214ENST00000427183 MZT1Q08AG7 82 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SLC6A19Q695T7 634 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 PKMYT1Q99640 499 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 KCNJ15Q99712 375 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 UQCC2Q9BRT2 126 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SPO11Q9Y5K1 396 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 LOC102724200A0A096LPH7 203 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF840PA6NDX5 716 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 METTL15A6NJ78 407 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 CHEK1O14757 476 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 IGHG1P01857 330 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 AADACP22760 399 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 IL4RP24394 825 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 PSMB3P49720 205 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 RAB11AP62491 216 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 HMGN3Q15651 99 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 VAMP3Q15836 100 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SLC14A2Q15849 920 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SYPL1Q16563 259 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF684Q5T5D7 378 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SLC16A14Q7RTX9 510 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 ACP2P11117 423 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 GPLD1P80108 840 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SPRED3Q2MJR0 410 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 RTL6Q6ICC9 239 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SFT2D1Q8WV19 159 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 RBPMSQ93062 196 aaKnown RBP11.67□□□□□ -0.54
HDLBP-214ENST00000427183 SLC41A2Q96JW4 573 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 C12orf42Q96LP6 360 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 TMEM72A0PK05 275 aa11.67□□□□□ -0.54
HDLBP-214ENST00000427183 RAB40ALP0C0E4 278 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms