RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 DAOP14920 347 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 NCF2P19878 526 aaPredicted RBP13.17□□□□□ -0.3
CRIM1-203ENST00000426856 GIFP27352 417 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 EPHA3P29320 983 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 THBS4P35443 961 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 CRATP43155 626 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 CRISP3P54108 245 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
CRIM1-203ENST00000426856 CLDN17P56750 224 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
CRIM1-203ENST00000426856 HOXC5Q00444 222 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 EGR4Q05215 589 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 GTDC1Q4AE62 458 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 FAM169BQ8N8A8 192 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 ZNF540Q8NDQ6 660 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 NUP37Q8NFH4 326 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 MFSD8Q8NHS3 518 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 STK35Q8TDR2 534 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 VPS33AQ96AX1 596 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 SLC25A36Q96CQ1 311 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 ZNF837Q96EG3 531 aaPredicted RBP13.17□□□□□ -0.3
CRIM1-203ENST00000426856 C1orf159Q96HA4 380 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 TMEM19Q96HH6 336 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 DOK1Q99704 481 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 RAB1BQ9H0U4 201 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 ZNF442Q9H7R0 627 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 CALML5Q9NZT1 146 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 B3GAT1Q9P2W7 334 aa13.17□□□□□ -0.3
CRIM1-203ENST00000426856 A0A096LPI6 279 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 IGHV2OR16-5A0A0B4J2B6 119 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 TMEM129A0AVI4 362 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 LILRA1O75019 489 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 TACSTD2P09758 323 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 CBR1P16152 277 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 PAX7P23759 505 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 RPS5P46782 204 aaKnown RBP13.16□□□□□ -0.3
CRIM1-203ENST00000426856 DSTNP60981 165 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 SQLEQ14534 574 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 LARS2Q15031 903 aaKnown RBP13.16□□□□□ -0.3
CRIM1-203ENST00000426856 CDK20Q8IZL9 346 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
CRIM1-203ENST00000426856 SNX18Q96RF0 628 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 ZBTB18Q99592 522 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 SPATA9Q9BWV2 254 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 TPT1P8Q9HAU6 139 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 PRDM4Q9UKN5 801 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 RCE1Q9Y256 329 aa13.16□□□□□ -0.3
CRIM1-203ENST00000426856 SH3PXD2BA1X283 911 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 SEC14L2O76054 403 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 NPR2P20594 1047 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 APEX1P27695 318 aaKnown RBP13.15□□□□□ -0.3
CRIM1-203ENST00000426856 NPRL3Q12980 569 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 TRIP10Q15642 601 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 MDP1Q86V88 176 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 MREGQ8N565 214 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 GLB1L3Q8NCI6 653 aaPredicted RBP13.15□□□□□ -0.3
CRIM1-203ENST00000426856 RSPO3Q9BXY4 272 aaPredicted RBP13.15□□□□□ -0.3
CRIM1-203ENST00000426856 GPR35Q9HC97 309 aa13.15□□□□□ -0.3
CRIM1-203ENST00000426856 MOV10Q9HCE1 1003 aaKnown RBP13.15□□□□□ -0.3
CRIM1-203ENST00000426856 LYNX1G3V0Z9 82 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 FZD7O75084 574 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 SLC43A1O75387 559 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 IL6P05231 212 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 NUDT7P0C024 238 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 ZCCHC18P0CG32 403 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 LYNX1P0DP58 116 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
CRIM1-203ENST00000426856 ZNF43P17038 809 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 CHN2P52757 468 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 MSMPQ1L6U9 139 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 CEACAM16Q2WEN9 425 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 PDCD4Q53EL6 469 aaKnown RBP13.14□□□□□ -0.31
CRIM1-203ENST00000426856 TNFAIP8L3Q5GJ75 292 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 LIPNQ5VXI9 398 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 WDR93Q6P2C0 686 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 TMEM123Q8N131 208 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 ZNF786Q8N393 782 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 CKAP2Q8WWK9 683 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 NEU4Q8WWR8 484 aaPredicted RBP13.14□□□□□ -0.31
CRIM1-203ENST00000426856 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
CRIM1-203ENST00000426856 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 NOX3Q9HBY0 568 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 CRLF2Q9HC73 371 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 DYNLRB1Q9NP97 96 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 KCNK9Q9NPC2 374 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
CRIM1-203ENST00000426856 A0A0G2JPF8 293 aa13.13□□□□□ -0.31
CRIM1-203ENST00000426856 HNRNPCL2B2RXH8 293 aa13.13□□□□□ -0.31
CRIM1-203ENST00000426856 HNRNPCL3B7ZW38 293 aa13.13□□□□□ -0.31
CRIM1-203ENST00000426856 M0R082 166 aa13.13□□□□□ -0.31
CRIM1-203ENST00000426856 HDAC3O15379 428 aa13.13□□□□□ -0.31
CRIM1-203ENST00000426856 TRAF3IP2O43734 574 aaPredicted RBP13.13□□□□□ -0.31
CRIM1-203ENST00000426856 HNRNPCL1O60812 293 aaKnown RBP13.13□□□□□ -0.31
CRIM1-203ENST00000426856 SLC22A3O75751 556 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms